RNA–Protein interactions for RNA: ENST00000517624.1

VIRMA-203, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 497 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-203ENST00000517624 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 EAF2Q96CJ1 260 aaPredicted RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 UPF3BQ9BZI7 483 aaKnown RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 GPR108Q9NPR9 543 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
VIRMA-203ENST00000517624 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 CEP126Q9P2H0 1117 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 ATP6V0A2Q9Y487 856 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 SPEF2Q9C093 1822 aa11.23□□□□□ -0.61
VIRMA-203ENST00000517624 PDE8BO95263 885 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 ATP5JP18859 108 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 PSMA5P28066 241 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 RNF20Q5VTR2 975 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 SLC51AQ86UW1 340 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 HELBQ8NG08 1087 aaPredicted RBP11.22□□□□□ -0.61
VIRMA-203ENST00000517624 SYT17Q9BSW7 474 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 RPAP1Q9BWH6 1393 aaPredicted RBP11.22□□□□□ -0.61
VIRMA-203ENST00000517624 ANKRD2Q9GZV1 360 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 HMG20BQ9P0W2 317 aa11.22□□□□□ -0.61
VIRMA-203ENST00000517624 BRCA1P38398 1863 aaKnown RBP11.21□□□□□ -0.61
VIRMA-203ENST00000517624 LRRC37AA6NMS7 1700 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 TAF5LO75529 589 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 AK2P54819 239 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 NECTIN1Q15223 517 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 TNNI3KQ59H18 835 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 DALRD3Q5D0E6 543 aaKnown RBP11.21□□□□□ -0.61
VIRMA-203ENST00000517624 VARS2Q5ST30 1063 aaKnown RBP11.21□□□□□ -0.61
VIRMA-203ENST00000517624 CC2D2BQ6DHV5 1058 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 FSD1Q9BTV5 496 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
VIRMA-203ENST00000517624 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 PODXL2Q9NZ53 605 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.61
VIRMA-203ENST00000517624 SNED1Q8TER0 1413 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 XDHP47989 1333 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
VIRMA-203ENST00000517624 FGFR2P21802 821 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 GPSM2P81274 684 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 NMIQ13287 307 aaPredicted RBP11.2□□□□□ -0.62
VIRMA-203ENST00000517624 UBE4AQ14139 1066 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 OLFM4Q6UX06 510 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 GAS2L3Q86XJ1 694 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 ANP32BQ92688 251 aaKnown RBP11.2□□□□□ -0.62
VIRMA-203ENST00000517624 MAP4K1Q92918 833 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 SYAP1Q96A49 352 aaPredicted RBP11.2□□□□□ -0.62
VIRMA-203ENST00000517624 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
VIRMA-203ENST00000517624 AKAP2Q9Y2D5 859 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 ATP6V1DQ9Y5K8 247 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 RBM8AQ9Y5S9 174 aaKnown RBP11.2□□□□□ -0.62
VIRMA-203ENST00000517624 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
VIRMA-203ENST00000517624 A0A1B0GUL6 1792 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 A0A1B0GUL7 405 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 WTIPA6NIX2 430 aaPredicted RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 SNAP23O00161 211 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 C21orf2O43822 256 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 PRPF40AO75400 957 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 CASTP20810 708 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 TIMM10P62072 90 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 PTH1RQ03431 593 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 PUM3Q15397 648 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 ZSCAN23Q3MJ62 389 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 RUFY3Q7L099 469 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 LPIN2Q92539 896 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 JAKMIP1Q96N16 626 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 PANK2Q9BZ23 570 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 PDRG1Q9NUG6 133 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 ANKIB1Q9P2G1 1089 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
VIRMA-203ENST00000517624 SMC3Q9UQE7 1217 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
VIRMA-203ENST00000517624 ZNF609O15014 1411 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 ZNF804BA4D1E1 1349 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 NCLP19338 710 aaKnown RBP11.18□□□□□ -0.62
VIRMA-203ENST00000517624 ATP2B4P23634 1241 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 KCNJ4P48050 445 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 KRT32Q14532 448 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 CSPP1Q1MSJ5 1256 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 C15orf52Q6ZUT6 534 aaKnown RBP11.18□□□□□ -0.62
VIRMA-203ENST00000517624 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
VIRMA-203ENST00000517624 MPNDQ8N594 471 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 TBC1D16Q8TBP0 767 aa11.18□□□□□ -0.62
VIRMA-203ENST00000517624 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
VIRMA-203ENST00000517624 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
VIRMA-203ENST00000517624 BOLA2Q9H3K6 86 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms