RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 FRAT2O75474 233 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-202ENST00000517619 CRKP46108 304 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 INHBEP58166 350 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 CHAF1AQ13111 956 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-202ENST00000517619 GRIK5Q16478 980 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 CAVIN4Q5BKX8 364 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 FBXO46Q6PJ61 603 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-202ENST00000517619 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 DZIP1LQ8IYY4 767 aaKnown RBP12.03□□□□□ -0.48
SPIDR-202ENST00000517619 ANKRD13AQ8IZ07 590 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 VGLL2Q8N8G2 317 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 SSH1Q8WYL5 1049 aa12.03□□□□□ -0.48
SPIDR-202ENST00000517619 BRCA2P51587 3418 aa12.02□□□□□ -0.48
SPIDR-202ENST00000517619 PDE8BO95263 885 aa12.02□□□□□ -0.49
SPIDR-202ENST00000517619 GJA5P36382 358 aa12.02□□□□□ -0.49
SPIDR-202ENST00000517619 FBXO33Q7Z6M2 555 aa12.02□□□□□ -0.49
SPIDR-202ENST00000517619 TMEM39BQ9GZU3 492 aa12.02□□□□□ -0.49
SPIDR-202ENST00000517619 ELP3Q9H9T3 547 aa12.02□□□□□ -0.49
SPIDR-202ENST00000517619 RBBP6Q7Z6E9 1792 aaKnown RBP12.01□□□□□ -0.49
SPIDR-202ENST00000517619 SLC34A2O95436 690 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 TNNI2P48788 182 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 TEKT1Q969V4 418 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 TEPSINQ96N21 525 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 USP44Q9H0E7 712 aa12.01□□□□□ -0.49
SPIDR-202ENST00000517619 BCAMP50895 628 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 CACNB3P54284 484 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 SLFN5Q08AF3 891 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 CRHR2Q13324 411 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
SPIDR-202ENST00000517619 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 TRIM17Q9Y577 477 aa12□□□□□ -0.49
SPIDR-202ENST00000517619 AK9Q5TCS8 1911 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 IFIT1P09914 478 aaKnown RBP11.99□□□□□ -0.49
SPIDR-202ENST00000517619 HDLBPQ00341 1268 aaKnown RBP11.99□□□□□ -0.49
SPIDR-202ENST00000517619 VGLL4Q14135 290 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 ALDH1L2Q3SY69 923 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 OTUD7BQ6GQQ9 843 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
SPIDR-202ENST00000517619 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 PTPN18Q99952 460 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
SPIDR-202ENST00000517619 MKI67P46013 3256 aaKnown RBP11.98□□□□□ -0.49
SPIDR-202ENST00000517619 ZSWIM8A7E2V4 1837 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 MAST3O60307 1309 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-202ENST00000517619 EYA2O00167 538 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 FGFR2P21802 821 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 RFX5P48382 616 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-202ENST00000517619 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPIDR-202ENST00000517619 ERO1AQ96HE7 468 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 TMOD2Q9NZR1 351 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 CSADQ9Y600 493 aa11.98□□□□□ -0.49
SPIDR-202ENST00000517619 DOCK2Q92608 1830 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 SLC5A1P13866 664 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 MAP3K9P80192 1104 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 CD99L2Q8TCZ2 262 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 LPIN2Q92539 896 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 ZDHHC15Q96MV8 337 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 SIL1Q9H173 461 aa11.97□□□□□ -0.49
SPIDR-202ENST00000517619 RPAP1Q9BWH6 1393 aaPredicted RBP11.96□□□□□ -0.49
SPIDR-202ENST00000517619 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 CCL15-CCL14A0A0B4J2E2 113 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 UBTFL1P0CB47 393 aaPredicted RBP11.96□□□□□ -0.49
SPIDR-202ENST00000517619 GTF2A2P52657 109 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 SP3Q02447 781 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 CCL15Q16663 113 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 APOBEC3HQ6NTF7 200 aaKnown RBP11.96□□□□□ -0.49
SPIDR-202ENST00000517619 HHIPL2Q6UWX4 724 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 WRNIP1Q96S55 665 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
SPIDR-202ENST00000517619 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 CAP1Q01518 475 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 TAF1CQ15572 869 aaPredicted RBP11.95□□□□□ -0.5
SPIDR-202ENST00000517619 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
SPIDR-202ENST00000517619 FAM83AQ86UY5 434 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 FAM43AQ8N2R8 423 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 WDR66Q8TBY9 1149 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 PTPN22Q9Y2R2 807 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 SNCAIPQ9Y6H5 919 aa11.95□□□□□ -0.5
SPIDR-202ENST00000517619 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 FKBP1CQ5VVH2 108 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 TRMT2AQ8IZ69 625 aaKnown RBP11.94□□□□□ -0.5
SPIDR-202ENST00000517619 ZKSCAN4Q969J2 545 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-202ENST00000517619 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 EFCC1Q9HA90 598 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 ZFYVE28Q9HCC9 887 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
SPIDR-202ENST00000517619 NOB1Q9ULX3 412 aaKnown RBP11.94□□□□□ -0.5
SPIDR-202ENST00000517619 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
SPIDR-202ENST00000517619 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms