RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 BEND3Q5T5X7 828 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 NBPF12Q5TAG4 269 aaPredicted RBP9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 MTMR14Q8NCE2 650 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 TBC1D22AQ8WUA7 517 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 GCC1Q96CN9 775 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 OPTNQ96CV9 577 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 WNK4Q96J92 1243 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CLMNQ96JQ2 1002 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 TDRD3Q9H7E2 651 aaKnown RBP9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ZFYVE28Q9HCC9 887 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 SERPINA10Q9UK55 444 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 MROH5Q6ZUA9 1318 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 COL1A1P02452 1464 aaPredicted RBP9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 IFIT1P09914 478 aaKnown RBP9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 SP3Q02447 781 aa9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 SLC4A8Q2Y0W8 1093 aa9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CCDC184Q52MB2 194 aa9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 C15orf52Q6ZUT6 534 aaKnown RBP9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CERS5Q8N5B7 392 aa9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 TEKT1Q969V4 418 aa9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 PCDH10Q9P2E7 1040 aa9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 IQSEC3Q9UPP2 1182 aaPredicted RBP9.24□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CCL15-CCL14A0A0B4J2E2 113 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 USP2O75604 605 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CRKP46108 304 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 GTF2A2P52657 109 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CASP7P55210 303 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 MAP3K9P80192 1104 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 TAF1CQ15572 869 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CCL15Q16663 113 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 DZIP1LQ8IYY4 767 aaKnown RBP9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CD99L2Q8TCZ2 262 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ZNF70Q9UC06 446 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF11B-202ENST00000517352 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CRHR2Q13324 411 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 MAP3K11Q16584 847 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 SLC9C1Q4G0N8 1177 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 DCAF15Q66K64 600 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 OTOP1Q7RTM1 612 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 HDAC5Q9UQL6 1122 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 PCDHAC2Q9Y5I4 1007 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 MAST3O60307 1309 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 COL4A1P02462 1669 aa9.22□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ZNF316A6NFI3 1004 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 EIF5BO60841 1220 aaKnown RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ECM2O94769 699 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 CETPP11597 493 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SLC5A1P13866 664 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 EPHA10Q5JZY3 1008 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 TDRD7Q8NHU6 1098 aaKnown RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SUCLG2Q96I99 432 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZBED3Q96IU2 234 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FAM84BQ96KN1 310 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 WRNIP1Q96S55 665 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 TMEM39BQ9GZU3 492 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 R3HDMLQ9H3Y0 253 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 BICC1Q9H694 974 aaKnown RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 BIN2Q9UBW5 565 aaPredicted RBP9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PTPN22Q9Y2R2 807 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FAM205AQ6ZU69 1335 aa9.21□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PDE8BO95263 885 aa9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 NBPF7P0C2Y1 421 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 CACNB3P54284 484 aa9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SNAPC2Q13487 334 aa9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PUM3Q15397 648 aaKnown RBP9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 AKAP11Q9UKA4 1901 aa9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SCN9AQ15858 1988 aa9.2□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FMNL1O95466 1100 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 HOXD10P28358 340 aa9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 BCAMP50895 628 aa9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 HDLBPQ00341 1268 aaKnown RBP9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 VGLL4Q14135 290 aa9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZSCAN29Q8IWY8 852 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 WDR66Q8TBY9 1149 aa9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PTPRCP08575 1304 aa9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 POLR2AP24928 1970 aaKnown RBP9.19□□□□□ -0.94
TNFRSF11B-202ENST00000517352 HAX1O00165 279 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 TCP10Q12799 353 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 LRRC24Q50LG9 513 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 MIGA2Q7L4E1 593 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ERO1BQ86YB8 467 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 ZNF341Q9BYN7 854 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SMC4Q9NTJ3 1288 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 CEP126Q9P2H0 1117 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 SUGT1Q9Y2Z0 365 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 RIPOR2Q9Y4F9 1068 aa9.18□□□□□ -0.94
TNFRSF11B-202ENST00000517352 E9PSI1 815 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 LDHBP07195 334 aaKnown RBP9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 UBTFL1P0CB47 393 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 GORABQ5T7V8 394 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FBXO33Q7Z6M2 555 aa9.17□□□□□ -0.94
TNFRSF11B-202ENST00000517352 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms