RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 NLRP12P59046 1061 aa7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 HDLBPQ00341 1268 aaKnown RBP7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 TRIM28Q13263 835 aaKnown RBP7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 SUZ12Q15022 739 aaKnown RBP7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 MAP3K11Q16584 847 aa7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 C9orf131Q5VYM1 1079 aa7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 STK35Q8TDR2 534 aa7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 NRSN2Q9GZP1 204 aa7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 KCNK4Q9NYG8 393 aa7.75□□□□□ -1.17
RNU6-1028P-201ENST00000517164 F6X3S4 739 aa7.74□□□□□ -1.17
RNU6-1028P-201ENST00000517164 COL8A1P27658 744 aa7.74□□□□□ -1.17
RNU6-1028P-201ENST00000517164 CD68P34810 354 aaPredicted RBP7.74□□□□□ -1.17
RNU6-1028P-201ENST00000517164 SULF2Q8IWU5 870 aa7.74□□□□□ -1.17
RNU6-1028P-201ENST00000517164 DDX54Q8TDD1 881 aaKnown RBP7.74□□□□□ -1.17
RNU6-1028P-201ENST00000517164 RNF34Q969K3 372 aa7.74□□□□□ -1.17
RNU6-1028P-201ENST00000517164 FAM181BA6NEQ2 426 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 DLL1O00548 723 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 ECEL1O95672 775 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 NME2P22392 152 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 PRRT3Q5FWE3 981 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 RASIP1Q5U651 963 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 PCNX4Q63HM2 1172 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 TTBK2Q6IQ55 1244 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 HS2ST1Q7LGA3 356 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 ERMP1Q7Z2K6 904 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 METTL16Q86W50 562 aaKnown RBP7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 USP26Q9BXU7 913 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 COPRSQ9NQ92 184 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 GGT7Q9UJ14 662 aa7.73□□□□□ -1.17
RNU6-1028P-201ENST00000517164 CTSBP07858 339 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 ELNP15502 786 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 BMP6P22004 513 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 AP3B2Q13367 1082 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 GRIK4Q16099 956 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 UBASH3BQ8TF42 649 aa7.72□□□□□ -1.17
RNU6-1028P-201ENST00000517164 WISP1O95388 367 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 CYP11A1P05108 521 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 SPATA31C1P0DKV0 1188 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 MAOBP27338 520 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ARNTP27540 789 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 LIG3P49916 1009 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 POU4F3Q15319 338 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 NT5DC4Q86YG4 428 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 CBX8Q9HC52 389 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 KBTBD4Q9NVX7 518 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 STK17AQ9UEE5 414 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 TLR6Q9Y2C9 796 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PCDHGB7Q9Y5F8 929 aa7.71□□□□□ -1.18
RNU6-1028P-201ENST00000517164 LOC100289279A0A1B0GTE1 492 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 DLGAP3O95886 979 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 GSTP1P09211 210 aaKnown RBP7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ZNF394Q53GI3 561 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 GRIN3AQ8TCU5 1115 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 DCAF11Q8TEB1 546 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 CORO1BQ9BR76 489 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 SAMM50Q9Y512 469 aa7.7□□□□□ -1.18
RNU6-1028P-201ENST00000517164 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RLBP1P12271 317 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 SELPP16109 830 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 GBP2P32456 591 aaPredicted RBP7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RAD51AP2Q09MP3 1159 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ZNF252P-AS1Q0IIN9 211 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 DUOXA2Q1HG44 320 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 IGF2-ASQ6U949 168 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 MPRIPQ6WCQ1 1025 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PHC3Q8NDX5 983 aa7.69□□□□□ -1.18
RNU6-1028P-201ENST00000517164 MINDY4BA8MYZ0 360 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 TFE3P19532 575 aaPredicted RBP7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RPS26P62854 115 aaKnown RBP7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 LLGL2Q6P1M3 1020 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 USP48Q86UV5 1035 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 KCNB2Q92953 911 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RHOVQ96L33 236 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 TMEM74Q96NL1 305 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 EMILIN2Q9BXX0 1053 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ERCC5P28715 1186 aaPredicted RBP7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RACK1P63244 317 aaKnown RBP7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PWP1Q13610 501 aa7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PDE3AQ14432 1141 aa7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ACAD11Q709F0 780 aa7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 MRPL18Q9H0U6 180 aaKnown RBP7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 CCDC86Q9H6F5 360 aaKnown RBP7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 DDX41Q9UJV9 622 aaKnown RBP7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 CYP8B1Q9UNU6 501 aa7.67□□□□□ -1.18
RNU6-1028P-201ENST00000517164 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 PF4P02776 101 aa7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 FAM160A1Q05DH4 1040 aa7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 LRRC14Q15048 493 aa7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 KIAA1211Q6ZU35 1233 aa7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 AGGF1Q8N302 714 aaeCLIP7.66□□□□□ -1.18
RNU6-1028P-201ENST00000517164 USP21Q9UK80 565 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms