RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 PDE8BO95263 885 aa18.33■□□□□ 0.52
SCARNA20.5-201ENST00000516991 CRKP46108 304 aa18.33■□□□□ 0.52
SCARNA20.5-201ENST00000516991 VGLL2Q8N8G2 317 aa18.33■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TDRD3Q9H7E2 651 aaKnown RBP18.33■□□□□ 0.52
SCARNA20.5-201ENST00000516991 MAST3O60307 1309 aa18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 SLC34A2O95436 690 aa18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 LRRC24Q50LG9 513 aa18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TNRC18O15417 2968 aaPredicted RBP18.32■□□□□ 0.52
SCARNA20.5-201ENST00000516991 IGF2BP3O00425 579 aaKnown RBP eCLIP18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 IFIT1P09914 478 aaKnown RBP18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 PUM3Q15397 648 aaKnown RBP18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TEKT1Q969V4 418 aa18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 R3HDMLQ9H3Y0 253 aa18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 SUGT1Q9Y2Z0 365 aa18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 MYH13Q9UKX3 1938 aa18.31■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TEPSINQ96N21 525 aa18.3■□□□□ 0.52
SCARNA20.5-201ENST00000516991 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
SCARNA20.5-201ENST00000516991 IQSEC3Q9UPP2 1182 aaPredicted RBP18.3■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TCP10L2B9ZVM9 353 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 GJA5P36382 358 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 OPTNQ96CV9 577 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 HOOK2Q96ED9 719 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 ERO1AQ96HE7 468 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 MRIQ9BWK5 157 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 ELP3Q9H9T3 547 aa18.29■□□□□ 0.52
SCARNA20.5-201ENST00000516991 ZDHHC15Q96MV8 337 aa18.28■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TMEM39BQ9GZU3 492 aa18.28■□□□□ 0.52
SCARNA20.5-201ENST00000516991 TRIM17Q9Y577 477 aa18.28■□□□□ 0.52
SCARNA20.5-201ENST00000516991 CSADQ9Y600 493 aa18.28■□□□□ 0.52
SCARNA20.5-201ENST00000516991 RPAP1Q9BWH6 1393 aaPredicted RBP18.28■□□□□ 0.52
SCARNA20.5-201ENST00000516991 EYA2O00167 538 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 SLC5A1P13866 664 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 FGFR2P21802 821 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 BCAMP50895 628 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 CRHR2Q13324 411 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 GRIK5Q16478 980 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 FKBP1CQ5VVH2 108 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 OTOP1Q7RTM1 612 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 SMC4Q9NTJ3 1288 aa18.27■□□□□ 0.52
SCARNA20.5-201ENST00000516991 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 VGLL4Q14135 290 aa18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 FAM83AQ86UY5 434 aa18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CDAN1Q8IWY9 1227 aa18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 LPIN2Q92539 896 aa18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 FBXO3Q9UK99 471 aa18.26■□□□□ 0.51
SCARNA20.5-201ENST00000516991 GTF2A2P52657 109 aa18.25■□□□□ 0.51
SCARNA20.5-201ENST00000516991 PRPF38BQ5VTL8 546 aaKnown RBP18.25■□□□□ 0.51
SCARNA20.5-201ENST00000516991 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
SCARNA20.5-201ENST00000516991 MS4A4AQ96JQ5 239 aa18.25■□□□□ 0.51
SCARNA20.5-201ENST00000516991 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
SCARNA20.5-201ENST00000516991 UBTFL1P0CB47 393 aaPredicted RBP18.24■□□□□ 0.51
SCARNA20.5-201ENST00000516991 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
SCARNA20.5-201ENST00000516991 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
SCARNA20.5-201ENST00000516991 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
SCARNA20.5-201ENST00000516991 PTPN18Q99952 460 aa18.24■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CCL15-CCL14A0A0B4J2E2 113 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 SPDYE5A6NIY4 337 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 WDHD1O75717 1129 aaPredicted RBP18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CIAO1O76071 339 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 SP3Q02447 781 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 ARHGEF6Q15052 776 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CCL15Q16663 113 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 DCAF15Q66K64 600 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CD99L2Q8TCZ2 262 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 BRI3BPQ8WY22 251 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 OTUD5Q96G74 571 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 EFCC1Q9HA90 598 aa18.23■□□□□ 0.51
SCARNA20.5-201ENST00000516991 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CACNB3P54284 484 aa18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 APOBEC3HQ6NTF7 200 aaKnown RBP18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 WRNIP1Q96S55 665 aa18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 ZFYVE28Q9HCC9 887 aa18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 ZCCHC17Q9NP64 241 aaKnown RBP18.22■□□□□ 0.51
SCARNA20.5-201ENST00000516991 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 ATG9AQ7Z3C6 839 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 ERO1BQ86YB8 467 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 TRMT2AQ8IZ69 625 aaKnown RBP18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CNKSR2Q8WXI2 1034 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CEP126Q9P2H0 1117 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 SNCAIPQ9Y6H5 919 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 HTTP42858 3142 aa18.21■□□□□ 0.51
SCARNA20.5-201ENST00000516991 CETPP11597 493 aa18.2■□□□□ 0.5
SCARNA20.5-201ENST00000516991 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
SCARNA20.5-201ENST00000516991 SEMA3EO15041 775 aa18.19■□□□□ 0.5
SCARNA20.5-201ENST00000516991 PPIL2Q13356 520 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms