RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 KRTAP1-5Q9BYS1 174 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 SEC31BQ9NQW1 1179 aa1.67□□□□□ -2.14
RNU6-539P-201ENST00000516665 KRTAP9-6A8MVA2 160 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 TMEM229AB2RXF0 380 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 CEACAM5P06731 702 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 CDC27P30260 824 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 GDNFP39905 211 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 TBCELQ5QJ74 424 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 CACTIN-AS1Q8N1I8 211 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 TMPRSS13Q9BYE2 586 aa1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 WDR33Q9C0J8 1336 aaKnown RBP1.66□□□□□ -2.14
RNU6-539P-201ENST00000516665 TMEM265A0A087WTH1 108 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 SASH3O75995 380 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 KRT10P13645 584 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 MAP7Q14244 749 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 KRTAP15-1Q3LI76 137 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 CYP27C1Q4G0S4 372 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 ZNF362Q5T0B9 420 aaPredicted RBP1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 SEZ6L2Q6UXD5 910 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 ZNF605Q86T29 641 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 ABHD4Q8TB40 342 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 CEP89Q96ST8 783 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 IKZF4Q9H2S9 585 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 SUGCTQ9HAC7 445 aa1.65□□□□□ -2.15
RNU6-539P-201ENST00000516665 DCAF8L2P0C7V8 631 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 ITIH2P19823 946 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 OXCT1P55809 520 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 PURAQ00577 322 aaKnown RBP1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 EPHA10Q5JZY3 1008 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 ATG9BQ674R7 924 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 ZMYND15Q9H091 742 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 LGR6Q9HBX8 967 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 CYP4F12Q9HCS2 524 aa1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 EPB41L4AQ9HCS5 686 aaPredicted RBP1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 SH2B1Q9NRF2 756 aaPredicted RBP1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 SCHIP1Q9P0W5 487 aaPredicted RBP1.64□□□□□ -2.15
RNU6-539P-201ENST00000516665 DLGAP3O95886 979 aa1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 ITGB3P05106 788 aa1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 USP4Q13107 963 aa1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 PHACTR1Q9C0D0 580 aa1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 RBSNQ9H1K0 784 aa1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 TLR7Q9NYK1 1049 aaKnown RBP1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 ACTL7BQ9Y614 415 aa1.63□□□□□ -2.15
RNU6-539P-201ENST00000516665 TEX51A0A1B0GUA7 166 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 SERTM1A2A2V5 107 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 FAM87AP0C7U9 286 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 ARID4AP29374 1257 aaPredicted RBP1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 ATP11AP98196 1134 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 CDSNQ15517 529 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 OXLD1Q5BKU9 147 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 C1orf53Q5VUE5 145 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 PAPD7Q5XG87 772 aaKnown RBP1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 FBXO31Q5XUX0 539 aaPredicted RBP1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 TMEM132EQ6IEE7 984 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 GRASPQ7Z6J2 395 aaPredicted RBP1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 TP53I13Q8NBR0 393 aaPredicted RBP1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 ASB11Q8WXH4 323 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 LOXL4Q96JB6 756 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 RBM15Q96T37 977 aaKnown RBP eCLIP1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 HCN4Q9Y3Q4 1203 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 IRAK3Q9Y616 596 aa1.62□□□□□ -2.15
RNU6-539P-201ENST00000516665 PEX10O60683 326 aa1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 SOX4Q06945 474 aaPredicted RBP1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 CEP135Q66GS9 1140 aa1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 SLC9A9Q8IVB4 645 aa1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 DVL3Q92997 716 aaPredicted RBP1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 SIGLEC10Q96LC7 697 aa1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 TNKS2Q9H2K2 1166 aa1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 CARS2Q9HA77 564 aaKnown RBP1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 DOLKQ9UPQ8 538 aa1.61□□□□□ -2.15
RNU6-539P-201ENST00000516665 MCCD1P59942 119 aaPredicted RBP1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 ERVFC1P60507 584 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 CDK5R2Q13319 367 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 CCDC142Q17RM4 750 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 HGSNATQ68CP4 663 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 ARHGAP27Q6ZUM4 889 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 TTC9BQ8N6N2 239 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 LINC01356Q8N9X3 169 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 WASF1Q92558 559 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 ZG16BQ96DA0 208 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 MKNK2Q9HBH9 465 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 DAGLAQ9Y4D2 1042 aa1.6□□□□□ -2.15
RNU6-539P-201ENST00000516665 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 CTGFP29279 349 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 PIP4K2BP78356 416 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 SLC7A3Q8WY07 619 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 USP26Q9BXU7 913 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 FAM105AQ9NUU6 356 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 DUSP10Q9Y6W6 482 aa1.59□□□□□ -2.15
RNU6-539P-201ENST00000516665 PSAPP07602 524 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 ADH5P11766 374 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 FBLN1P23142 703 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 KCNC1P48547 511 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 CLK2P49760 499 aaKnown RBP1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 PTK7Q13308 1070 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 ZKSCAN2Q63HK3 967 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 SPATA3Q8NHX4 192 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 RNF32Q9H0A6 362 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 SNX11Q9Y5W9 270 aa1.58□□□□□ -2.16
RNU6-539P-201ENST00000516665 H3BRJ5 948 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms