RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 CFAP157Q5JU67 520 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 CAPZA3Q96KX2 299 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 SMTNP53814 917 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 CLSTN2Q9H4D0 955 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 ZBED4O75132 1171 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 CCT6AP40227 531 aaKnown RBP12.42□□□□□ -0.42
TRIM41-209ENST00000515834 BAG6P46379 1132 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
TRIM41-209ENST00000515834 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 USP21Q9UK80 565 aa12.42□□□□□ -0.42
TRIM41-209ENST00000515834 PLCH2O75038 1416 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 MBD4O95243 580 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 ABL1P00519 1130 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 KRT19P08727 400 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 FAM200AQ8TCP9 573 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 FAM89AQ96GI7 184 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 H7C1D1 291 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 TTLL3Q9Y4R7 772 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 NEMFO60524 1076 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 UBE2HP62256 183 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 ZNF174Q15697 407 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
TRIM41-209ENST00000515834 TACC1O75410 805 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 ANO6Q4KMQ2 910 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 NSMFQ6X4W1 530 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 ZSCAN30Q86W11 494 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 MRRFQ96E11 262 aaKnown RBP12.41□□□□□ -0.42
TRIM41-209ENST00000515834 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
TRIM41-209ENST00000515834 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 AOPEPQ8N6M6 819 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 SPC25Q9HBM1 224 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRIM41-209ENST00000515834 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.4□□□□□ -0.42
TRIM41-209ENST00000515834 ATP2A2P16615 1042 aaKnown RBP12.4□□□□□ -0.42
TRIM41-209ENST00000515834 PPANQ9NQ55 473 aaKnown RBP12.4□□□□□ -0.42
TRIM41-209ENST00000515834 BICDL2A1A5D9 508 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 ZSCAN22P10073 491 aaPredicted RBP12.4□□□□□ -0.42
TRIM41-209ENST00000515834 SDSP20132 328 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 PPP1R9BQ96SB3 815 aa12.4□□□□□ -0.42
TRIM41-209ENST00000515834 EPB41P11171 864 aaKnown RBP12.4□□□□□ -0.43
TRIM41-209ENST00000515834 NCAPH2Q6IBW4 605 aa12.4□□□□□ -0.43
TRIM41-209ENST00000515834 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.43
TRIM41-209ENST00000515834 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.43
TRIM41-209ENST00000515834 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.43
TRIM41-209ENST00000515834 SMC6Q96SB8 1091 aa12.4□□□□□ -0.43
TRIM41-209ENST00000515834 FAM204AQ9H8W3 233 aa12.4□□□□□ -0.43
TRIM41-209ENST00000515834 IQGAP2Q13576 1575 aa12.4□□□□□ -0.43
TRIM41-209ENST00000515834 PPIP5K2O43314 1243 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 GSDMBQ8TAX9 411 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 NCOA1Q15788 1441 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 KCNK9Q9NPC2 374 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 CSADQ9Y600 493 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 GMNNO75496 209 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 MYCP01106 439 aaPredicted RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 VWA3AA6NCI4 1184 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 CUL4BQ13620 913 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 SYNJ1O43426 1573 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 ITGA6P23229 1130 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 HOOK2Q96ED9 719 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 NSRP1Q9H0G5 558 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 ARMT1Q9H993 441 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 SV2BQ7L1I2 683 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 PRPF31Q8WWY3 499 aaKnown RBP12.39□□□□□ -0.43
TRIM41-209ENST00000515834 KIFAP3Q92845 792 aa12.39□□□□□ -0.43
TRIM41-209ENST00000515834 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 CCDC42Q96M95 316 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
TRIM41-209ENST00000515834 RTL1A6NKG5 1358 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 INF2Q27J81 1249 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 DCAF5Q96JK2 942 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 DNM2P50570 870 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 SUPT20HQ8NEM7 779 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 ARHGEF35A5YM69 484 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 TAF5LO75529 589 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 ERCC5P28715 1186 aaPredicted RBP12.38□□□□□ -0.43
TRIM41-209ENST00000515834 FAM170AA1A519 330 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 TRAF5O00463 557 aa12.38□□□□□ -0.43
TRIM41-209ENST00000515834 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms