RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 TDRD3Q9H7E2 651 aaKnown RBP20.23■□□□□ 0.83
SDHC-209ENST00000515731 MKI67P46013 3256 aaKnown RBP20.22■□□□□ 0.83
SDHC-209ENST00000515731 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
SDHC-209ENST00000515731 CRKP46108 304 aa20.22■□□□□ 0.83
SDHC-209ENST00000515731 OTOP1Q7RTM1 612 aa20.22■□□□□ 0.83
SDHC-209ENST00000515731 MRPL50Q8N5N7 158 aaKnown RBP20.22■□□□□ 0.83
SDHC-209ENST00000515731 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
SDHC-209ENST00000515731 TBC1D22AQ8WUA7 517 aa20.22■□□□□ 0.83
SDHC-209ENST00000515731 PTPN18Q99952 460 aa20.22■□□□□ 0.83
SDHC-209ENST00000515731 BICC1Q9H694 974 aaKnown RBP20.22■□□□□ 0.83
SDHC-209ENST00000515731 PCDH10Q9P2E7 1040 aa20.22■□□□□ 0.83
SDHC-209ENST00000515731 PDE8BO95263 885 aa20.21■□□□□ 0.83
SDHC-209ENST00000515731 INTS3Q68E01 1043 aaKnown RBP20.21■□□□□ 0.83
SDHC-209ENST00000515731 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
SDHC-209ENST00000515731 ERO1AQ96HE7 468 aa20.21■□□□□ 0.83
SDHC-209ENST00000515731 MS4A4AQ96JQ5 239 aa20.21■□□□□ 0.83
SDHC-209ENST00000515731 PTPRCP08575 1304 aa20.21■□□□□ 0.83
SDHC-209ENST00000515731 KIF16BQ96L93 1317 aa20.21■□□□□ 0.83
SDHC-209ENST00000515731 BRCA2P51587 3418 aa20.21■□□□□ 0.83
SDHC-209ENST00000515731 TNNI2P48788 182 aa20.2■□□□□ 0.82
SDHC-209ENST00000515731 CRHR2Q13324 411 aa20.2■□□□□ 0.82
SDHC-209ENST00000515731 LRRC24Q50LG9 513 aa20.2■□□□□ 0.82
SDHC-209ENST00000515731 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
SDHC-209ENST00000515731 TRIM17Q9Y577 477 aa20.2■□□□□ 0.82
SDHC-209ENST00000515731 GRIK5Q16478 980 aa20.19■□□□□ 0.82
SDHC-209ENST00000515731 CAVIN4Q5BKX8 364 aa20.19■□□□□ 0.82
SDHC-209ENST00000515731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.19■□□□□ 0.82
SDHC-209ENST00000515731 OPTNQ96CV9 577 aa20.19■□□□□ 0.82
SDHC-209ENST00000515731 PTPN22Q9Y2R2 807 aa20.19■□□□□ 0.82
SDHC-209ENST00000515731 SUGT1Q9Y2Z0 365 aa20.19■□□□□ 0.82
SDHC-209ENST00000515731 KIAA0100Q14667 2235 aaKnown RBP20.19■□□□□ 0.82
SDHC-209ENST00000515731 MAP3K9P80192 1104 aa20.18■□□□□ 0.82
SDHC-209ENST00000515731 FKBP1CQ5VVH2 108 aa20.18■□□□□ 0.82
SDHC-209ENST00000515731 VPS37DQ86XT2 251 aa20.18■□□□□ 0.82
SDHC-209ENST00000515731 CDAN1Q8IWY9 1227 aa20.18■□□□□ 0.82
SDHC-209ENST00000515731 TMEM39BQ9GZU3 492 aa20.18■□□□□ 0.82
SDHC-209ENST00000515731 TCP10L2B9ZVM9 353 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 FGFR2P21802 821 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 SP3Q02447 781 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 METTL24Q5JXM2 366 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 FAM83AQ86UY5 434 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 ZDHHC15Q96MV8 337 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 USP44Q9H0E7 712 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 ELP3Q9H9T3 547 aa20.17■□□□□ 0.82
SDHC-209ENST00000515731 GTF2A2P52657 109 aa20.16■□□□□ 0.82
SDHC-209ENST00000515731 TEKT1Q969V4 418 aa20.16■□□□□ 0.82
SDHC-209ENST00000515731 VGLL4Q14135 290 aa20.15■□□□□ 0.82
SDHC-209ENST00000515731 CD99L2Q8TCZ2 262 aa20.15■□□□□ 0.82
SDHC-209ENST00000515731 BRI3BPQ8WY22 251 aa20.15■□□□□ 0.82
SDHC-209ENST00000515731 ARMC5Q96C12 935 aa20.15■□□□□ 0.82
SDHC-209ENST00000515731 EFCC1Q9HA90 598 aa20.15■□□□□ 0.82
SDHC-209ENST00000515731 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
SDHC-209ENST00000515731 RPAP1Q9BWH6 1393 aaPredicted RBP20.14■□□□□ 0.81
SDHC-209ENST00000515731 MAST3O60307 1309 aa20.14■□□□□ 0.81
SDHC-209ENST00000515731 E9PSI1 815 aa20.14■□□□□ 0.81
SDHC-209ENST00000515731 RFX5P48382 616 aaPredicted RBP20.14■□□□□ 0.81
SDHC-209ENST00000515731 BCAMP50895 628 aa20.14■□□□□ 0.81
SDHC-209ENST00000515731 APOBEC3HQ6NTF7 200 aaKnown RBP20.14■□□□□ 0.81
SDHC-209ENST00000515731 HHIPL2Q6UWX4 724 aa20.14■□□□□ 0.81
SDHC-209ENST00000515731 ZCCHC17Q9NP64 241 aaKnown RBP20.14■□□□□ 0.81
SDHC-209ENST00000515731 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.81
SDHC-209ENST00000515731 SPDYE5A6NIY4 337 aa20.13■□□□□ 0.81
SDHC-209ENST00000515731 FRAT2O75474 233 aaPredicted RBP20.13■□□□□ 0.81
SDHC-209ENST00000515731 CAP1Q01518 475 aa20.13■□□□□ 0.81
SDHC-209ENST00000515731 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
SDHC-209ENST00000515731 PUM3Q15397 648 aaKnown RBP20.13■□□□□ 0.81
SDHC-209ENST00000515731 CNKSR2Q8WXI2 1034 aa20.13■□□□□ 0.81
SDHC-209ENST00000515731 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
SDHC-209ENST00000515731 HOOK2Q96ED9 719 aa20.13■□□□□ 0.81
SDHC-209ENST00000515731 CSADQ9Y600 493 aa20.13■□□□□ 0.81
SDHC-209ENST00000515731 CCL15-CCL14A0A0B4J2E2 113 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 ZBTB22O15209 634 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 IFIT1P09914 478 aaKnown RBP20.12■□□□□ 0.81
SDHC-209ENST00000515731 ARHGEF6Q15052 776 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 CCL15Q16663 113 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 ALDH1L2Q3SY69 923 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 KLHDC4Q8TBB5 520 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 ZFYVE28Q9HCC9 887 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 FBXO3Q9UK99 471 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 AK9Q5TCS8 1911 aa20.12■□□□□ 0.81
SDHC-209ENST00000515731 EYA2O00167 538 aa20.11■□□□□ 0.81
SDHC-209ENST00000515731 SLFN5Q08AF3 891 aa20.11■□□□□ 0.81
SDHC-209ENST00000515731 ERO1BQ86YB8 467 aa20.11■□□□□ 0.81
SDHC-209ENST00000515731 SNCAIPQ9Y6H5 919 aa20.11■□□□□ 0.81
SDHC-209ENST00000515731 POTEFA5A3E0 1075 aa20.1■□□□□ 0.81
SDHC-209ENST00000515731 TAF1CQ15572 869 aaPredicted RBP20.1■□□□□ 0.81
SDHC-209ENST00000515731 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
SDHC-209ENST00000515731 WDR66Q8TBY9 1149 aa20.1■□□□□ 0.81
SDHC-209ENST00000515731 LPIN2Q92539 896 aa20.1■□□□□ 0.81
SDHC-209ENST00000515731 TMOD2Q9NZR1 351 aa20.1■□□□□ 0.81
SDHC-209ENST00000515731 CETPP11597 493 aa20.09■□□□□ 0.81
SDHC-209ENST00000515731 CACNB3P54284 484 aa20.09■□□□□ 0.81
SDHC-209ENST00000515731 ATG9AQ7Z3C6 839 aa20.09■□□□□ 0.81
SDHC-209ENST00000515731 OTUD5Q96G74 571 aa20.09■□□□□ 0.81
SDHC-209ENST00000515731 PPIL2Q13356 520 aa20.08■□□□□ 0.81
SDHC-209ENST00000515731 DCAF15Q66K64 600 aa20.08■□□□□ 0.81
SDHC-209ENST00000515731 ZSWIM8A7E2V4 1837 aa20.07■□□□□ 0.8
SDHC-209ENST00000515731 TLR2O60603 784 aa20.07■□□□□ 0.8
SDHC-209ENST00000515731 SLC5A1P13866 664 aa20.07■□□□□ 0.8
SDHC-209ENST00000515731 TRMT2AQ8IZ69 625 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms