RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 GRAPQ13588 217 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 SLC9C2Q5TAH2 1124 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 CCDC129Q6ZRS4 1044 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 DHX32Q7L7V1 743 aaKnown RBP12.14□□□□□ -0.47
SNF8-214ENST00000515174 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
SNF8-214ENST00000515174 GRAPLQ8TC17 118 aaPredicted RBP12.14□□□□□ -0.47
SNF8-214ENST00000515174 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
SNF8-214ENST00000515174 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 DENND2AQ9ULE3 1009 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 DOCK2Q92608 1830 aa12.14□□□□□ -0.47
SNF8-214ENST00000515174 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 FOXP2O15409 715 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 GPAA1O43292 621 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 BBOX1O75936 387 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 BRD1O95696 1058 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 FGAP02671 866 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 CHGBP05060 677 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 TMC4Q7Z404 712 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 FAM84BQ96KN1 310 aaPredicted RBP12.13□□□□□ -0.47
SNF8-214ENST00000515174 CRAMP1Q96RY5 1269 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 RRAGCQ9HB90 399 aa12.13□□□□□ -0.47
SNF8-214ENST00000515174 IRS2Q9Y4H2 1338 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 ZNF646O15015 1829 aaPredicted RBP12.12□□□□□ -0.47
SNF8-214ENST00000515174 GNAT2P19087 354 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 EVCP57679 992 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 IMMTQ16891 758 aaKnown RBP12.12□□□□□ -0.47
SNF8-214ENST00000515174 SKOR2Q2VWA4 1001 aaPredicted RBP12.12□□□□□ -0.47
SNF8-214ENST00000515174 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
SNF8-214ENST00000515174 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 ZDHHC9Q9Y397 364 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
SNF8-214ENST00000515174 ZNF532Q9HCE3 1301 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 WDR90Q96KV7 1748 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
SNF8-214ENST00000515174 E7EWF7 191 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 SNAP23O00161 211 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 IDH1O75874 414 aaKnown RBP12.11□□□□□ -0.47
SNF8-214ENST00000515174 PRELPP51888 382 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
SNF8-214ENST00000515174 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 DALRD3Q5D0E6 543 aaKnown RBP12.11□□□□□ -0.47
SNF8-214ENST00000515174 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
SNF8-214ENST00000515174 GOLGA6L22H0YM25 854 aa12.1□□□□□ -0.47
SNF8-214ENST00000515174 BAG4O95429 457 aaKnown RBP12.1□□□□□ -0.47
SNF8-214ENST00000515174 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
SNF8-214ENST00000515174 ME3Q16798 604 aa12.1□□□□□ -0.47
SNF8-214ENST00000515174 STOX1Q6ZVD7 989 aa12.1□□□□□ -0.47
SNF8-214ENST00000515174 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
SNF8-214ENST00000515174 LLPHQ9BRT6 129 aaKnown RBP12.1□□□□□ -0.47
SNF8-214ENST00000515174 PODXL2Q9NZ53 605 aa12.1□□□□□ -0.47
SNF8-214ENST00000515174 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
SNF8-214ENST00000515174 TAF6LQ9Y6J9 622 aa12.1□□□□□ -0.47
SNF8-214ENST00000515174 WDR33Q9C0J8 1336 aaKnown RBP12.1□□□□□ -0.47
SNF8-214ENST00000515174 ZNF213O14771 459 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 CPA1P15085 419 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 RGS22Q8NE09 1264 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 AIDAQ96BJ3 306 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 ZNF274Q96GC6 653 aaPredicted RBP12.09□□□□□ -0.47
SNF8-214ENST00000515174 MTA3Q9BTC8 594 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 BRIP1Q9BX63 1249 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 PSME4Q14997 1843 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 XDHP47989 1333 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 SALL1Q9NSC2 1324 aa12.09□□□□□ -0.47
SNF8-214ENST00000515174 PDCP20941 246 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 ATP2B4P23634 1241 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 GYG1P46976 350 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 GIMAP6Q6P9H5 292 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 Q6ZUG5 572 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 VPS37DQ86XT2 251 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 MAGEB6Q8N7X4 407 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 RPGRQ92834 1020 aaKnown RBP12.08□□□□□ -0.48
SNF8-214ENST00000515174 LRP2BPQ9P2M1 347 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 FER1L6Q2WGJ9 1857 aa12.08□□□□□ -0.48
SNF8-214ENST00000515174 TRAK2O60296 914 aa12.07□□□□□ -0.48
SNF8-214ENST00000515174 PFKFB2O60825 505 aa12.07□□□□□ -0.48
SNF8-214ENST00000515174 MCM5P33992 734 aa12.07□□□□□ -0.48
SNF8-214ENST00000515174 NT5C2P49902 561 aa12.07□□□□□ -0.48
SNF8-214ENST00000515174 ST3GAL1Q11201 340 aa12.07□□□□□ -0.48
SNF8-214ENST00000515174 SPTY2D1Q68D10 685 aaPredicted RBP12.07□□□□□ -0.48
SNF8-214ENST00000515174 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
SNF8-214ENST00000515174 NCOA7Q8NI08 942 aa12.07□□□□□ -0.48
SNF8-214ENST00000515174 CCDC88AQ3V6T2 1871 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 LARGE1O95461 756 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 HSPA1AP0DMV8 641 aaKnown RBP12.06□□□□□ -0.48
SNF8-214ENST00000515174 HSPA1BP0DMV9 641 aaKnown RBP12.06□□□□□ -0.48
SNF8-214ENST00000515174 KCNA3P22001 575 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 CHRNA5P30532 468 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 PKP1Q13835 747 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 GSE1Q14687 1217 aa12.06□□□□□ -0.48
SNF8-214ENST00000515174 TTLL5Q6EMB2 1281 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms