RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ZNF512BQ96KM6 892 aaPredicted RBP8.72□□□□□ -1.01
SMAD1-213ENST00000514778 LRRCC1Q9C099 1032 aa8.72□□□□□ -1.01
SMAD1-213ENST00000514778 FPGT-TNNI3KV9GXZ4 949 aa8.72□□□□□ -1.01
SMAD1-213ENST00000514778 FAM205AQ6ZU69 1335 aa8.72□□□□□ -1.01
SMAD1-213ENST00000514778 CHD4Q14839 1912 aa8.72□□□□□ -1.01
SMAD1-213ENST00000514778 A0A1B0GUL6 1792 aa8.71□□□□□ -1.01
SMAD1-213ENST00000514778 SPEF2Q9C093 1822 aa8.71□□□□□ -1.01
SMAD1-213ENST00000514778 IQCA1LA6NCM1 817 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 USP17L3A6NCW0 530 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 USP17L4A6NCW7 530 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 WTIPA6NIX2 430 aaPredicted RBP8.71□□□□□ -1.02
SMAD1-213ENST00000514778 YDJCA8MPS7 323 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 UQCRFS1P1P0C7P4 283 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 TXNRD3Q86VQ6 643 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 AGBL3Q8NEM8 1001 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 TBC1D22AQ8WUA7 517 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 DBNDD1Q9H9R9 158 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 SUGT1Q9Y2Z0 365 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 GOLGB1Q14789 3259 aaKnown RBP8.71□□□□□ -1.02
SMAD1-213ENST00000514778 COL4A5P29400 1685 aa8.71□□□□□ -1.02
SMAD1-213ENST00000514778 SNAP23O00161 211 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 KLRK1P26718 216 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 GYG1P46976 350 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 TIMM10P62072 90 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 CCDC158Q5M9N0 1113 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 DACT2Q5SW24 774 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 GORABQ5T7V8 394 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 CCDC102BQ68D86 513 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 TTLL5Q6EMB2 1281 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 RSBN1LQ6PCB5 846 aaPredicted RBP8.7□□□□□ -1.02
SMAD1-213ENST00000514778 TMED8Q6PL24 325 aaPredicted RBP8.7□□□□□ -1.02
SMAD1-213ENST00000514778 SMC5Q8IY18 1101 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 WDR66Q8TBY9 1149 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 PTCD2Q8WV60 388 aaKnown RBP8.7□□□□□ -1.02
SMAD1-213ENST00000514778 EAF2Q96CJ1 260 aaPredicted RBP8.7□□□□□ -1.02
SMAD1-213ENST00000514778 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 NEUROD6Q96NK8 337 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 DENND2AQ9ULE3 1009 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 TIAM2Q8IVF5 1701 aa8.7□□□□□ -1.02
SMAD1-213ENST00000514778 IFIT2P09913 472 aaKnown RBP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 VEGFAP15692 232 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 ARID4AP29374 1257 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 BCAMP50895 628 aa8.69□□□□□ -1.02
SMAD1-213ENST00000514778 PNMA8AQ86V59 439 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 ZGPATQ8N5A5 531 aaKnown RBP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 GPR101Q96P66 508 aaPredicted RBP8.69□□□□□ -1.02
SMAD1-213ENST00000514778 GMLQ99445 158 aa8.69□□□□□ -1.02
SMAD1-213ENST00000514778 MRIQ9BWK5 157 aa8.69□□□□□ -1.02
SMAD1-213ENST00000514778 ZNF541Q9H0D2 1346 aa8.69□□□□□ -1.02
SMAD1-213ENST00000514778 SALL1Q9NSC2 1324 aa8.69□□□□□ -1.02
SMAD1-213ENST00000514778 ARAP2Q8WZ64 1704 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 WDR90Q96KV7 1748 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 UTRNP46939 3433 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 H7C1D1 291 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 PSMD14O00487 310 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 FRAT2O75474 233 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 RAD17O75943 681 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 DDNO94850 711 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 ZNF280AP59817 542 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 GTF2IP78347 998 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 HDLBPQ00341 1268 aaKnown RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 AACSQ86V21 672 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 PLPP6Q8IY26 295 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 OGFOD1Q8N543 542 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 GPATCH3Q96I76 525 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 GPRC5DQ9NZD1 345 aa8.68□□□□□ -1.02
SMAD1-213ENST00000514778 DBNLQ9UJU6 430 aaKnown RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.68□□□□□ -1.02
SMAD1-213ENST00000514778 MAST3O60307 1309 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 ADORA1P30542 326 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 PHKA1P46020 1223 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 SCNN1DP51172 638 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 DSG2Q14126 1118 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 TTC39AQ5SRH9 613 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 SPTY2D1Q68D10 685 aaPredicted RBP8.67□□□□□ -1.02
SMAD1-213ENST00000514778 TTC41PQ6P2S7 1318 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 USP50Q70EL3 339 aaPredicted RBP8.67□□□□□ -1.02
SMAD1-213ENST00000514778 TICAM2Q86XR7 235 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 ZNF784Q8NCA9 323 aaPredicted RBP8.67□□□□□ -1.02
SMAD1-213ENST00000514778 MTMR14Q8NCE2 650 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 DBNDD2Q9BQY9 259 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 IL1RAPL2Q9NP60 686 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 ADARB2Q9NS39 739 aaKnown RBP8.67□□□□□ -1.02
SMAD1-213ENST00000514778 HACL1Q9UJ83 578 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 HDAC9Q9UKV0 1011 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 GJA3Q9Y6H8 435 aa8.67□□□□□ -1.02
SMAD1-213ENST00000514778 IGHDP01880 384 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 ATP5JP18859 108 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 PBX2P40425 430 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 GMPSP49915 693 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-213ENST00000514778 IRX6P78412 446 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-213ENST00000514778 NUCB1Q02818 461 aa8.66□□□□□ -1.02
SMAD1-213ENST00000514778 MFSD14BQ5SR56 506 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms