RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 STK35Q8TDR2 534 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 ADAM19Q9H013 955 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 AVENQ9NQS1 362 aaPredicted RBP7.62□□□□□ -1.19
RFC1-216ENST00000514572 SNTG2Q9NY99 539 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 NAGPAQ9UK23 515 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 PHF24Q9UPV7 400 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 PPM1GO15355 546 aaPredicted RBP7.61□□□□□ -1.19
RFC1-216ENST00000514572 HSD3B2P26439 372 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 PCDH1Q08174 1060 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 ZNF252P-AS1Q0IIN9 211 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 SEZ6Q53EL9 994 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 CCDC81Q6ZN84 652 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 SYT9Q86SS6 491 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 REXO1Q8N1G1 1221 aaKnown RBP7.61□□□□□ -1.19
RFC1-216ENST00000514572 MIR1-1HGQ9H1L0 117 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 CACNA2D2Q9NY47 1150 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 ZNRF3Q9ULT6 936 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 CYP8B1Q9UNU6 501 aa7.61□□□□□ -1.19
RFC1-216ENST00000514572 C2CD2LO14523 706 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 SMAD7O15105 426 aaKnown RBP7.6□□□□□ -1.19
RFC1-216ENST00000514572 SMNDC1O75940 238 aaKnown RBP eCLIP7.6□□□□□ -1.19
RFC1-216ENST00000514572 GHRHP01286 108 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 PPP2R3AQ06190 1150 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 TNNI3KQ59H18 835 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 SCARA3Q6AZY7 606 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 REC114Q7Z4M0 266 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 PDZD3Q86UT5 571 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 ANKRD13AQ8IZ07 590 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 RBBP8NLQ8NC74 664 aaPredicted RBP7.6□□□□□ -1.19
RFC1-216ENST00000514572 ANAPC16Q96DE5 110 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 RNPC3Q96LT9 517 aaKnown RBP7.6□□□□□ -1.19
RFC1-216ENST00000514572 DEPDC7Q96QD5 511 aa7.6□□□□□ -1.19
RFC1-216ENST00000514572 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.6□□□□□ -1.19
RFC1-216ENST00000514572 FAM221BA6H8Z2 402 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 TLR3O15455 904 aaKnown RBP7.59□□□□□ -1.19
RFC1-216ENST00000514572 EIF2AK2P19525 551 aaKnown RBP7.59□□□□□ -1.19
RFC1-216ENST00000514572 SEPT6Q14141 434 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 TRIM55Q9BYV6 548 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 KLF15Q9UIH9 416 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 SLC6A14Q9UN76 642 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 SAMM50Q9Y512 469 aa7.59□□□□□ -1.19
RFC1-216ENST00000514572 NISCHQ9Y2I1 1504 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 ADARB2-AS1A8MUL3 147 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 ESRRAP11474 423 aaPredicted RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 ZNF157P51786 506 aaPredicted RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 CWF19L2Q2TBE0 894 aaKnown RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 PERM1Q5SV97 790 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 CEP135Q66GS9 1140 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 CELF2-AS1Q8N7Q2 184 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 CPLX3Q8WVH0 158 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 SRPK1Q96SB4 655 aaKnown RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 LPIN3Q9BQK8 851 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 UBE2OQ9C0C9 1292 aaKnown RBP7.58□□□□□ -1.2
RFC1-216ENST00000514572 RBSNQ9H1K0 784 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 EHMT1Q9H9B1 1298 aa7.58□□□□□ -1.2
RFC1-216ENST00000514572 SELPP16109 830 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 PTPRAP18433 802 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 ARNTP27540 789 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 ZNF165P49910 485 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 EIF6P56537 245 aaKnown RBP7.57□□□□□ -1.2
RFC1-216ENST00000514572 LRRC14Q15048 493 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 OR6P1Q8NGX9 317 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 GRIN3AQ8TCU5 1115 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 CCDC113Q9H0I3 377 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 BRMS1Q9HCU9 246 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 FRRS1LQ9P0K9 344 aa7.57□□□□□ -1.2
RFC1-216ENST00000514572 GPR25O00155 361 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 ATE1O95260 518 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 PTPN11Q06124 597 aaPredicted RBP7.56□□□□□ -1.2
RFC1-216ENST00000514572 DDR2Q16832 855 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 FAM35AQ86V20 835 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 LSRQ86X29 649 aaPredicted RBP7.56□□□□□ -1.2
RFC1-216ENST00000514572 TTC9Q92623 222 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 TRERF1Q96PN7 1200 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 PRR12Q9ULL5 1215 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 TRIM33Q9UPN9 1127 aa7.56□□□□□ -1.2
RFC1-216ENST00000514572 POLR3KQ9Y2Y1 108 aaPredicted RBP7.56□□□□□ -1.2
RFC1-216ENST00000514572 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
RFC1-216ENST00000514572 PPFIA3O75145 1194 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 IMPDH2P12268 514 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 CPB1P15086 417 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 ADH7P40394 386 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 CASP7P55210 303 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
RFC1-216ENST00000514572 CLCQ05315 142 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 PLEKHG4Q58EX7 1191 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 NRSN2Q9GZP1 204 aa7.55□□□□□ -1.2
RFC1-216ENST00000514572 TRIM37O94972 964 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 ARAFP10398 606 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 EPHA1P21709 976 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 RPL6Q02878 288 aaKnown RBP7.54□□□□□ -1.2
RFC1-216ENST00000514572 GAS6Q14393 721 aa7.54□□□□□ -1.2
RFC1-216ENST00000514572 C19orf47Q8N9M1 422 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms