RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SCN9AQ15858 1988 aa10.18□□□□□ -0.78
CCL28-204ENST00000514421 APBB1O00213 710 aa10.18□□□□□ -0.78
CCL28-204ENST00000514421 RBM5P52756 815 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCL28-204ENST00000514421 CFAP100Q494V2 611 aa10.18□□□□□ -0.78
CCL28-204ENST00000514421 SPTY2D1Q68D10 685 aaPredicted RBP10.18□□□□□ -0.78
CCL28-204ENST00000514421 ZNF512BQ96KM6 892 aaPredicted RBP10.18□□□□□ -0.78
CCL28-204ENST00000514421 GLIS2Q9BZE0 524 aaPredicted RBP10.18□□□□□ -0.78
CCL28-204ENST00000514421 IL1RAPL2Q9NP60 686 aa10.18□□□□□ -0.78
CCL28-204ENST00000514421 SERPINA10Q9UK55 444 aa10.18□□□□□ -0.78
CCL28-204ENST00000514421 SPEF2Q9C093 1822 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
CCL28-204ENST00000514421 SALL1Q9NSC2 1324 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 PDE4AP27815 886 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
CCL28-204ENST00000514421 RASGRF1Q13972 1273 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 GRIK5Q16478 980 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 TTC39AQ5SRH9 613 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 ANGEL2Q5VTE6 544 aaKnown RBP10.17□□□□□ -0.78
CCL28-204ENST00000514421 HHIPL2Q6UWX4 724 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 KRT26Q7Z3Y9 468 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 AACSQ86V21 672 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 SULF1Q8IWU6 871 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 ZGPATQ8N5A5 531 aaKnown RBP10.17□□□□□ -0.78
CCL28-204ENST00000514421 PRMT6Q96LA8 375 aaPredicted RBP10.17□□□□□ -0.78
CCL28-204ENST00000514421 HMG20BQ9P0W2 317 aa10.17□□□□□ -0.78
CCL28-204ENST00000514421 DBNLQ9UJU6 430 aaKnown RBP10.17□□□□□ -0.78
CCL28-204ENST00000514421 MAST3O60307 1309 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 ASTN2O75129 1339 aaPredicted RBP10.16□□□□□ -0.78
CCL28-204ENST00000514421 PITPNM2Q9BZ72 1349 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 SPDYE2BA6NHP3 402 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 TMEM88BA6NKF7 163 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 MYO1BO43795 1136 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 LDHBP07195 334 aaKnown RBP10.16□□□□□ -0.78
CCL28-204ENST00000514421 IFIT2P09913 472 aaKnown RBP10.16□□□□□ -0.78
CCL28-204ENST00000514421 SPDYE6P0CI01 402 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 CRKP46108 304 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 SPATA5Q8NB90 893 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 TEKT1Q969V4 418 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 LRRCC1Q9C099 1032 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 ABCF2Q9UG63 623 aa10.16□□□□□ -0.78
CCL28-204ENST00000514421 TRAF5O00463 557 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 IGSF3O75054 1194 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 MCAMP43121 646 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 FMR1Q06787 632 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCL28-204ENST00000514421 CST9Q5W186 159 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 SNRKQ9NRH2 765 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 CREBZFQ9NS37 354 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 TLR7Q9NYK1 1049 aaKnown RBP10.15□□□□□ -0.78
CCL28-204ENST00000514421 PCDHAC2Q9Y5I4 1007 aa10.15□□□□□ -0.78
CCL28-204ENST00000514421 CELF2O95319 508 aaKnown RBP10.14□□□□□ -0.79
CCL28-204ENST00000514421 LDHCP07864 332 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 PRDX5P30044 214 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 C8orf34Q49A92 452 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 APOBEC3HQ6NTF7 200 aaKnown RBP10.14□□□□□ -0.79
CCL28-204ENST00000514421 DLK2Q6UY11 383 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 TBC1D9Q6ZT07 1266 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 APOBEC3FQ8IUX4 373 aaKnown RBP10.14□□□□□ -0.79
CCL28-204ENST00000514421 SLF2Q8IX21 1173 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
CCL28-204ENST00000514421 ZDHHC15Q96MV8 337 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 BCL11AQ9H165 835 aa10.14□□□□□ -0.79
CCL28-204ENST00000514421 TDRD3Q9H7E2 651 aaKnown RBP10.14□□□□□ -0.79
CCL28-204ENST00000514421 ZNF70Q9UC06 446 aaPredicted RBP10.14□□□□□ -0.79
CCL28-204ENST00000514421 CLRN2A0PK11 232 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 ADM5C9JUS6 153 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
CCL28-204ENST00000514421 CYP2E1P05181 493 aaPredicted RBP10.13□□□□□ -0.79
CCL28-204ENST00000514421 SPDYE2Q495Y8 402 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 PI16Q6UXB8 463 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 SKAP1Q86WV1 359 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 DNAJC5GQ8N7S2 189 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCL28-204ENST00000514421 GCC1Q96CN9 775 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 DEFB129Q9H1M3 183 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 RAI14Q9P0K7 980 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 LRP2BPQ9P2M1 347 aa10.13□□□□□ -0.79
CCL28-204ENST00000514421 ATP5JP18859 108 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 ZAP70P43403 619 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 GSTO1P78417 241 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 HTRA3P83110 453 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 NUCB1Q02818 461 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 FKBP1CQ5VVH2 108 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 DZIP1Q86YF9 867 aaKnown RBP10.12□□□□□ -0.79
CCL28-204ENST00000514421 C2orf69Q8N8R5 385 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 NSUN4Q96CB9 384 aaKnown RBP10.12□□□□□ -0.79
CCL28-204ENST00000514421 CDCA5Q96FF9 252 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 ZNF408Q9H9D4 720 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 VEZTQ9HBM0 779 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 TMOD2Q9NZR1 351 aa10.12□□□□□ -0.79
CCL28-204ENST00000514421 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
CCL28-204ENST00000514421 SCAF8Q9UPN6 1271 aaKnown RBP10.12□□□□□ -0.79
CCL28-204ENST00000514421 AOX1Q06278 1338 aa10.11□□□□□ -0.79
CCL28-204ENST00000514421 HAX1O00165 279 aa10.11□□□□□ -0.79
CCL28-204ENST00000514421 TNNI2P48788 182 aa10.11□□□□□ -0.79
CCL28-204ENST00000514421 MECOMQ03112 1051 aa10.11□□□□□ -0.79
CCL28-204ENST00000514421 RASA3Q14644 834 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms