RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TSHZ2Q9NRE2 1034 aa11.99□□□□□ -0.49
TOPBP1-209ENST00000513818 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
TOPBP1-209ENST00000513818 CNOT7Q9UIV1 285 aaKnown RBP11.99□□□□□ -0.49
TOPBP1-209ENST00000513818 HACL1Q9UJ83 578 aa11.99□□□□□ -0.49
TOPBP1-209ENST00000513818 DENND2AQ9ULE3 1009 aa11.99□□□□□ -0.49
TOPBP1-209ENST00000513818 DOCK2Q92608 1830 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 ASTN2O75129 1339 aaPredicted RBP11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 AOX1Q06278 1338 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 SEMA3EO15041 775 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 EPHX2P34913 555 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 NUCB1Q02818 461 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 EAPPQ56P03 285 aaPredicted RBP11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 CHD1LQ86WJ1 897 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 TAF1DQ9H5J8 278 aaPredicted RBP11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 ANTXR1Q9H6X2 564 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 PIH1D3Q9NQM4 214 aaKnown RBP11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 ABCF2Q9UG63 623 aa11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 TTF2Q9UNY4 1162 aaKnown RBP11.98□□□□□ -0.49
TOPBP1-209ENST00000513818 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 KIF3CO14782 793 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 MAP4K4O95819 1239 aaPredicted RBP11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 CYP2E1P05181 493 aaPredicted RBP11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 MX1P20591 662 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 RPS12P25398 132 aaKnown RBP11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 PDE4AP27815 886 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 DIXDC1Q155Q3 683 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 WDR66Q8TBY9 1149 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
TOPBP1-209ENST00000513818 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 GOLIM4O00461 696 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 ZNF280AP59817 542 aaPredicted RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 TBC1D22AQ8WUA7 517 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 DPF2Q92785 391 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 ZNF512BQ96KM6 892 aaPredicted RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 MYOZ2Q9NPC6 264 aa11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 SCAF8Q9UPN6 1271 aaKnown RBP11.96□□□□□ -0.49
TOPBP1-209ENST00000513818 PDS5AQ29RF7 1337 aaKnown RBP11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 SALL1Q9NSC2 1324 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 H7C1D1 291 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 CHGBP05060 677 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 LDHBP07195 334 aaKnown RBP11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 ATP5JP18859 108 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 RBM5P52756 815 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 CENPQQ7L2Z9 268 aaPredicted RBP11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 DZIP1Q86YF9 867 aaKnown RBP11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 REM2Q8IYK8 340 aaPredicted RBP11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 PI4K2BQ8TCG2 481 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 GPATCH3Q96I76 525 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 RAI14Q9P0K7 980 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 HDAC9Q9UKV0 1011 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 MYH2Q9UKX2 1941 aa11.95□□□□□ -0.5
TOPBP1-209ENST00000513818 IDH1O75874 414 aaKnown RBP11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 CRKP46108 304 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 PDE1AP54750 535 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 NBPF9Q3BBW0 867 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 CFAP100Q494V2 611 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 OGFOD1Q8N543 542 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 ZNF384Q8TF68 577 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 HAUS7Q99871 368 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 PPP4R2Q9NY27 417 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 LRP2BPQ9P2M1 347 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 ECM29Q5VYK3 1845 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 MYH7P12883 1935 aa11.94□□□□□ -0.5
TOPBP1-209ENST00000513818 CLRN2A0PK11 232 aa11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 MECOMQ03112 1051 aa11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 PLEKHM2Q8IWE5 1019 aa11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 ZGPATQ8N5A5 531 aaKnown RBP11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 PAG1Q9NWQ8 432 aa11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 GGA3Q9NZ52 723 aa11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 DAGLAQ9Y4D2 1042 aa11.93□□□□□ -0.5
TOPBP1-209ENST00000513818 TTC41PQ6P2S7 1318 aa11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 WNT10BO00744 389 aa11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 DLGAP5Q15398 846 aa11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 MAP1SQ66K74 1059 aaPredicted RBP11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 USP50Q70EL3 339 aaPredicted RBP11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 ADGRA1Q86SQ6 560 aa11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
TOPBP1-209ENST00000513818 MAST3O60307 1309 aa11.91□□□□□ -0.5
TOPBP1-209ENST00000513818 ADM5C9JUS6 153 aa11.91□□□□□ -0.5
TOPBP1-209ENST00000513818 GLRX3O76003 335 aaKnown RBP11.91□□□□□ -0.5
TOPBP1-209ENST00000513818 CACNB3P54284 484 aa11.91□□□□□ -0.5
TOPBP1-209ENST00000513818 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
TOPBP1-209ENST00000513818 ANGEL2Q5VTE6 544 aaKnown RBP11.91□□□□□ -0.5
TOPBP1-209ENST00000513818 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms