RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 CCDC152Q4G0S7 254 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 ALYREFQ86V81 257 aaKnown RBP15.55■□□□□ 0.08
SFXN1-210ENST00000513725 ANKRD18AQ8IVF6 992 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
SFXN1-210ENST00000513725 LBHD1Q9BQE6 289 aaPredicted RBP15.55■□□□□ 0.08
SFXN1-210ENST00000513725 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.55■□□□□ 0.08
SFXN1-210ENST00000513725 CACNA1AO00555 2505 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 NCOR1O75376 2440 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 IRF5Q13568 498 aa15.54■□□□□ 0.08
SFXN1-210ENST00000513725 CFAP100Q494V2 611 aa15.54■□□□□ 0.08
SFXN1-210ENST00000513725 ANKRD23Q86SG2 305 aa15.54■□□□□ 0.08
SFXN1-210ENST00000513725 ADAMTS19Q8TE59 1207 aa15.54■□□□□ 0.08
SFXN1-210ENST00000513725 ATXN2LQ8WWM7 1075 aaKnown RBP15.54■□□□□ 0.08
SFXN1-210ENST00000513725 PRMT6Q96LA8 375 aaPredicted RBP15.54■□□□□ 0.08
SFXN1-210ENST00000513725 UHRF1Q96T88 793 aaPredicted RBP15.54■□□□□ 0.08
SFXN1-210ENST00000513725 PDHXO00330 501 aa15.53■□□□□ 0.08
SFXN1-210ENST00000513725 IRF6O14896 467 aa15.53■□□□□ 0.08
SFXN1-210ENST00000513725 ISCA1Q9BUE6 129 aa15.53■□□□□ 0.08
SFXN1-210ENST00000513725 PCDHAC2Q9Y5I4 1007 aa15.53■□□□□ 0.08
SFXN1-210ENST00000513725 MGAMO43451 1857 aa15.52■□□□□ 0.08
SFXN1-210ENST00000513725 ATP5J2-PTCD1G3V325 749 aa15.52■□□□□ 0.08
SFXN1-210ENST00000513725 PPIL2Q13356 520 aa15.52■□□□□ 0.08
SFXN1-210ENST00000513725 TTYH1Q9H313 450 aaPredicted RBP15.52■□□□□ 0.08
SFXN1-210ENST00000513725 DDX60LQ5H9U9 1706 aaKnown RBP15.51■□□□□ 0.07
SFXN1-210ENST00000513725 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
SFXN1-210ENST00000513725 USP38Q8NB14 1042 aa15.51■□□□□ 0.07
SFXN1-210ENST00000513725 IL27Q8NEV9 243 aa15.51■□□□□ 0.07
SFXN1-210ENST00000513725 TAOK2Q9UL54 1235 aa15.51■□□□□ 0.07
SFXN1-210ENST00000513725 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
SFXN1-210ENST00000513725 SNCAIPQ9Y6H5 919 aa15.51■□□□□ 0.07
SFXN1-210ENST00000513725 BCRP11274 1271 aa15.5■□□□□ 0.07
SFXN1-210ENST00000513725 RBM5P52756 815 aaKnown RBP eCLIP15.5■□□□□ 0.07
SFXN1-210ENST00000513725 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
SFXN1-210ENST00000513725 ASB2Q96Q27 587 aa15.5■□□□□ 0.07
SFXN1-210ENST00000513725 PARK7Q99497 189 aaKnown RBP15.5■□□□□ 0.07
SFXN1-210ENST00000513725 F8W031 263 aaPredicted RBP15.49■□□□□ 0.07
SFXN1-210ENST00000513725 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
SFXN1-210ENST00000513725 SMAD3P84022 425 aaKnown RBP15.49■□□□□ 0.07
SFXN1-210ENST00000513725 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
SFXN1-210ENST00000513725 TXNRD3Q86VQ6 643 aa15.49■□□□□ 0.07
SFXN1-210ENST00000513725 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
SFXN1-210ENST00000513725 TNPO2O14787 897 aaKnown RBP15.48■□□□□ 0.07
SFXN1-210ENST00000513725 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
SFXN1-210ENST00000513725 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
SFXN1-210ENST00000513725 TEPSINQ96N21 525 aa15.48■□□□□ 0.07
SFXN1-210ENST00000513725 CCDC85AQ96PX6 553 aaPredicted RBP15.48■□□□□ 0.07
SFXN1-210ENST00000513725 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
SFXN1-210ENST00000513725 P2RX7Q99572 595 aaKnown RBP15.48■□□□□ 0.07
SFXN1-210ENST00000513725 HMX1Q9NP08 348 aaPredicted RBP15.48■□□□□ 0.07
SFXN1-210ENST00000513725 MINPP1Q9UNW1 487 aa15.48■□□□□ 0.07
SFXN1-210ENST00000513725 LEMD3Q9Y2U8 911 aa15.48■□□□□ 0.07
SFXN1-210ENST00000513725 PFASO15067 1338 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 AOX1Q06278 1338 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 TNNI2P48788 182 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 PPATQ06203 517 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 TRIM28Q13263 835 aaKnown RBP15.47■□□□□ 0.07
SFXN1-210ENST00000513725 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 CERS5Q8N5B7 392 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.47■□□□□ 0.07
SFXN1-210ENST00000513725 WRNIP1Q96S55 665 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 LRFN3Q9BTN0 628 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 THEGQ9P2T0 379 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 OGDHLQ9ULD0 1010 aa15.47■□□□□ 0.07
SFXN1-210ENST00000513725 PDE8AO60658 829 aa15.46■□□□□ 0.07
SFXN1-210ENST00000513725 MRPS5P82675 430 aaKnown RBP15.46■□□□□ 0.07
SFXN1-210ENST00000513725 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
SFXN1-210ENST00000513725 ZKSCAN4Q969J2 545 aaPredicted RBP15.46■□□□□ 0.07
SFXN1-210ENST00000513725 BSDC1Q9NW68 430 aaPredicted RBP15.46■□□□□ 0.07
SFXN1-210ENST00000513725 ZNF70Q9UC06 446 aaPredicted RBP15.46■□□□□ 0.07
SFXN1-210ENST00000513725 TSPYL4Q9UJ04 414 aa15.46■□□□□ 0.07
SFXN1-210ENST00000513725 HMGCRP04035 888 aa15.45■□□□□ 0.06
SFXN1-210ENST00000513725 LRRC26Q2I0M4 334 aa15.45■□□□□ 0.06
SFXN1-210ENST00000513725 COA7Q96BR5 231 aa15.45■□□□□ 0.06
SFXN1-210ENST00000513725 TMEM39BQ9GZU3 492 aa15.45■□□□□ 0.06
SFXN1-210ENST00000513725 MUC6Q6W4X9 2439 aa15.44■□□□□ 0.06
SFXN1-210ENST00000513725 NEFMP07197 916 aa15.44■□□□□ 0.06
SFXN1-210ENST00000513725 SHHQ15465 462 aa15.44■□□□□ 0.06
SFXN1-210ENST00000513725 CD209Q9NNX6 404 aa15.44■□□□□ 0.06
SFXN1-210ENST00000513725 PRKAG2Q9UGJ0 569 aa15.44■□□□□ 0.06
SFXN1-210ENST00000513725 TCP10L2B9ZVM9 353 aa15.43■□□□□ 0.06
SFXN1-210ENST00000513725 CYP2C8P10632 490 aa15.43■□□□□ 0.06
SFXN1-210ENST00000513725 COL6A1P12109 1028 aa15.43■□□□□ 0.06
SFXN1-210ENST00000513725 FKBP1AP62942 108 aaKnown RBP15.43■□□□□ 0.06
SFXN1-210ENST00000513725 TDRD3Q9H7E2 651 aaKnown RBP15.43■□□□□ 0.06
SFXN1-210ENST00000513725 TMEM31Q5JXX7 168 aa15.42■□□□□ 0.06
SFXN1-210ENST00000513725 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
SFXN1-210ENST00000513725 ARAP2Q8WZ64 1704 aa15.42■□□□□ 0.06
SFXN1-210ENST00000513725 KLRK1P26718 216 aa15.41■□□□□ 0.06
SFXN1-210ENST00000513725 MRE11P49959 708 aa15.41■□□□□ 0.06
SFXN1-210ENST00000513725 PPM1EQ8WY54 764 aa15.41■□□□□ 0.06
SFXN1-210ENST00000513725 KCNH4Q9UQ05 1017 aa15.41■□□□□ 0.06
SFXN1-210ENST00000513725 KCNJ4P48050 445 aa15.4■□□□□ 0.06
SFXN1-210ENST00000513725 GRIN2CQ14957 1233 aa15.4■□□□□ 0.06
SFXN1-210ENST00000513725 ANKRD2Q9GZV1 360 aa15.4■□□□□ 0.06
SFXN1-210ENST00000513725 DLG5Q8TDM6 1919 aa15.39■□□□□ 0.05
SFXN1-210ENST00000513725 PCCAP05165 728 aaPredicted RBP15.39■□□□□ 0.05
SFXN1-210ENST00000513725 MOGSQ13724 837 aa15.39■□□□□ 0.05
SFXN1-210ENST00000513725 C9orf50Q5SZB4 431 aa15.39■□□□□ 0.05
SFXN1-210ENST00000513725 CHPF2Q9P2E5 772 aa15.39■□□□□ 0.05
SFXN1-210ENST00000513725 SERPINA10Q9UK55 444 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms