RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 PDE8BO95263 885 aa16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 CHAF1AQ13111 956 aaPredicted RBP16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 TNFAIP1Q13829 316 aa16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 ANKRD13AQ8IZ07 590 aa16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
POLR2J3-217ENST00000513438 TCP10L2B9ZVM9 353 aa16.81■□□□□ 0.28
POLR2J3-217ENST00000513438 IGF2BP3O00425 579 aaKnown RBP eCLIP16.81■□□□□ 0.28
POLR2J3-217ENST00000513438 GJA5P36382 358 aa16.81■□□□□ 0.28
POLR2J3-217ENST00000513438 BCAMP50895 628 aa16.81■□□□□ 0.28
POLR2J3-217ENST00000513438 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
POLR2J3-217ENST00000513438 PDE4DIPQ5VU43 2346 aa16.8■□□□□ 0.28
POLR2J3-217ENST00000513438 FBXO46Q6PJ61 603 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-217ENST00000513438 TEPSINQ96N21 525 aa16.8■□□□□ 0.28
POLR2J3-217ENST00000513438 TNNI2P48788 182 aa16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 TBC1D22AQ8WUA7 517 aa16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 TMEM39BQ9GZU3 492 aa16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
POLR2J3-217ENST00000513438 ALDH1L2Q3SY69 923 aa16.78■□□□□ 0.28
POLR2J3-217ENST00000513438 OTUD7BQ6GQQ9 843 aa16.78■□□□□ 0.28
POLR2J3-217ENST00000513438 PTPN18Q99952 460 aa16.78■□□□□ 0.28
POLR2J3-217ENST00000513438 TESPA1A2RU30 521 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 IFIT1P09914 478 aaKnown RBP16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 FGFR2P21802 821 aa16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 TEKT1Q969V4 418 aa16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 OPTNQ96CV9 577 aa16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 MRIQ9BWK5 157 aa16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
POLR2J3-217ENST00000513438 EYA2O00167 538 aa16.76■□□□□ 0.27
POLR2J3-217ENST00000513438 CACNB3P54284 484 aa16.76■□□□□ 0.27
POLR2J3-217ENST00000513438 PUM3Q15397 648 aaKnown RBP16.76■□□□□ 0.27
POLR2J3-217ENST00000513438 SMC4Q9NTJ3 1288 aa16.76■□□□□ 0.27
POLR2J3-217ENST00000513438 CRHR2Q13324 411 aa16.75■□□□□ 0.27
POLR2J3-217ENST00000513438 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
POLR2J3-217ENST00000513438 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
POLR2J3-217ENST00000513438 MS4A4AQ96JQ5 239 aa16.75■□□□□ 0.27
POLR2J3-217ENST00000513438 ARAP2Q8WZ64 1704 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 SLC5A1P13866 664 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 VGLL4Q14135 290 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 APOBEC3HQ6NTF7 200 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 LPIN2Q92539 896 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 SUGT1Q9Y2Z0 365 aa16.74■□□□□ 0.27
POLR2J3-217ENST00000513438 KIF16BQ96L93 1317 aa16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 HHIPL2Q6UWX4 724 aa16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 NOB1Q9ULX3 412 aaKnown RBP16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 CSADQ9Y600 493 aa16.73■□□□□ 0.27
POLR2J3-217ENST00000513438 MAST3O60307 1309 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 LAMB1P07942 1786 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 OTOFQ9HC10 1997 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 CCL15-CCL14A0A0B4J2E2 113 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 GTF2A2P52657 109 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 SP3Q02447 781 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 CCL15Q16663 113 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 FKBP1CQ5VVH2 108 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 FAM83AQ86UY5 434 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 WDR66Q8TBY9 1149 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 BRI3BPQ8WY22 251 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 SIL1Q9H173 461 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 PTPN22Q9Y2R2 807 aa16.72■□□□□ 0.27
POLR2J3-217ENST00000513438 OTUD5Q96G74 571 aa16.71■□□□□ 0.27
POLR2J3-217ENST00000513438 EFCC1Q9HA90 598 aa16.71■□□□□ 0.27
POLR2J3-217ENST00000513438 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
POLR2J3-217ENST00000513438 TAF1CQ15572 869 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-217ENST00000513438 INTS3Q68E01 1043 aaKnown RBP16.7■□□□□ 0.26
POLR2J3-217ENST00000513438 ZKSCAN4Q969J2 545 aaPredicted RBP16.7■□□□□ 0.26
POLR2J3-217ENST00000513438 GCC1Q96CN9 775 aa16.7■□□□□ 0.26
POLR2J3-217ENST00000513438 ZFYVE28Q9HCC9 887 aa16.7■□□□□ 0.26
POLR2J3-217ENST00000513438 FBXO3Q9UK99 471 aa16.7■□□□□ 0.26
POLR2J3-217ENST00000513438 SPDYE5A6NIY4 337 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 CIAO1O76071 339 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 CAP1Q01518 475 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 ATP2B3Q16720 1220 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 MIGA2Q7L4E1 593 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 ERO1BQ86YB8 467 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 FAM43AQ8N2R8 423 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 HOOK2Q96ED9 719 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 WRNIP1Q96S55 665 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 SNCAIPQ9Y6H5 919 aa16.69■□□□□ 0.26
POLR2J3-217ENST00000513438 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
POLR2J3-217ENST00000513438 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-217ENST00000513438 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms