RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 PIM2Q9P1W9 311 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 FER1L6Q2WGJ9 1857 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 SCN9AQ15858 1988 aa11.25□□□□□ -0.61
DHFR-206ENST00000513048 CCDC88AQ3V6T2 1871 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 IGSF3O75054 1194 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 EVX2Q03828 476 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 NECTIN1Q15223 517 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 GRIK5Q16478 980 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 VPS53Q5VIR6 699 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 KIAA1211Q6ZU35 1233 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 MAGEB6Q8N7X4 407 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 WDR66Q8TBY9 1149 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 NSUN4Q96CB9 384 aaKnown RBP11.24□□□□□ -0.61
DHFR-206ENST00000513048 PSMD1Q99460 953 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 ZC3H12CQ9C0D7 883 aaKnown RBP11.24□□□□□ -0.61
DHFR-206ENST00000513048 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
DHFR-206ENST00000513048 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 LRP2BPQ9P2M1 347 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 JAG2Q9Y219 1238 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 RBM8AQ9Y5S9 174 aaKnown RBP11.24□□□□□ -0.61
DHFR-206ENST00000513048 COL4A5P29400 1685 aa11.24□□□□□ -0.61
DHFR-206ENST00000513048 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 FRAT2O75474 233 aaPredicted RBP11.23□□□□□ -0.61
DHFR-206ENST00000513048 PRDX5P30044 214 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 ANAPC15P60006 121 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 KIAA2012Q0VF49 1180 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 RTKN2Q8IZC4 609 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 SUPT20HQ8NEM7 779 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 STRBPQ96SI9 672 aaKnown RBP11.23□□□□□ -0.61
DHFR-206ENST00000513048 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 ABCF2Q9UG63 623 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 PSME4Q14997 1843 aa11.23□□□□□ -0.61
DHFR-206ENST00000513048 GPAA1O43292 621 aa11.22□□□□□ -0.61
DHFR-206ENST00000513048 HSPD1P10809 573 aaKnown RBP11.22□□□□□ -0.61
DHFR-206ENST00000513048 CYP7A1P22680 504 aa11.22□□□□□ -0.61
DHFR-206ENST00000513048 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
DHFR-206ENST00000513048 MECOMQ03112 1051 aa11.22□□□□□ -0.61
DHFR-206ENST00000513048 DALRD3Q5D0E6 543 aaKnown RBP11.22□□□□□ -0.61
DHFR-206ENST00000513048 TMED8Q6PL24 325 aaPredicted RBP11.22□□□□□ -0.61
DHFR-206ENST00000513048 ERICH6Q7L0X2 663 aa11.22□□□□□ -0.61
DHFR-206ENST00000513048 RAI14Q9P0K7 980 aa11.22□□□□□ -0.61
DHFR-206ENST00000513048 SNX14Q9Y5W7 946 aa11.22□□□□□ -0.61
DHFR-206ENST00000513048 SLC27A2O14975 620 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 MCCP23508 829 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 GTF2IP78347 998 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 AOC3Q16853 763 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 SOGA3Q5TF21 947 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 CREB3L3Q68CJ9 461 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.61
DHFR-206ENST00000513048 PODNQ7Z5L7 613 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 ZGPATQ8N5A5 531 aaKnown RBP11.21□□□□□ -0.61
DHFR-206ENST00000513048 CERS5Q8N5B7 392 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
DHFR-206ENST00000513048 DBNDD1Q9H9R9 158 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 TAF6LQ9Y6J9 622 aa11.21□□□□□ -0.61
DHFR-206ENST00000513048 MYH2Q9UKX2 1941 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 YDJCA8MPS7 323 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 ECE2O60344 883 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 MBD4O95243 580 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
DHFR-206ENST00000513048 FKBP1AP62942 108 aaKnown RBP11.2□□□□□ -0.62
DHFR-206ENST00000513048 RABEP1Q15276 862 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 TSGA10IPQ3SY00 556 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 NAA16Q6N069 864 aaPredicted RBP11.2□□□□□ -0.62
DHFR-206ENST00000513048 LCORLQ8N3X6 602 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 TBC1D22AQ8WUA7 517 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 ARMT1Q9H993 441 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 KCNQ5Q9NR82 932 aa11.2□□□□□ -0.62
DHFR-206ENST00000513048 PPP1R1BQ9UD71 204 aaPredicted RBP11.2□□□□□ -0.62
DHFR-206ENST00000513048 RPAP1Q9BWH6 1393 aaPredicted RBP11.19□□□□□ -0.62
DHFR-206ENST00000513048 LAMA4Q16363 1823 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 LTBP3Q9NS15 1303 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 GSG1L2A8MUP6 293 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 NFKBIEO00221 500 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 PPIP5K2O43314 1243 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 CYP21A2P08686 494 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 ALX1Q15699 326 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 MFSD14BQ5SR56 506 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 DACT2Q5SW24 774 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 MIGA1Q8NAN2 632 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 SNX21Q969T3 373 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
DHFR-206ENST00000513048 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
DHFR-206ENST00000513048 MXD3Q9BW11 206 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
DHFR-206ENST00000513048 ZNF277Q9NRM2 450 aaPredicted RBP11.19□□□□□ -0.62
DHFR-206ENST00000513048 SUGT1Q9Y2Z0 365 aa11.19□□□□□ -0.62
DHFR-206ENST00000513048 GAKO14976 1311 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 ZMYM6O95789 1325 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 MAGEB6P1A0A0J9YX57 407 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
DHFR-206ENST00000513048 PRKAB2O43741 272 aa11.18□□□□□ -0.62
DHFR-206ENST00000513048 CD2BP2O95400 341 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms