RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
CLCN3-208ENST00000512813 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
CLCN3-208ENST00000512813 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
CLCN3-208ENST00000512813 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 BCRP11274 1271 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 SMAD3P84022 425 aaKnown RBP12.41□□□□□ -0.42
CLCN3-208ENST00000512813 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
CLCN3-208ENST00000512813 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 ERO1BQ86YB8 467 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 ARAP2Q8WZ64 1704 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 THEGQ9P2T0 379 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 PCDHAC2Q9Y5I4 1007 aa12.41□□□□□ -0.42
CLCN3-208ENST00000512813 IRF6O14896 467 aa12.4□□□□□ -0.42
CLCN3-208ENST00000512813 PPIL2Q13356 520 aa12.4□□□□□ -0.42
CLCN3-208ENST00000512813 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
CLCN3-208ENST00000512813 LBHD1Q9BQE6 289 aaPredicted RBP12.4□□□□□ -0.42
CLCN3-208ENST00000512813 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
CLCN3-208ENST00000512813 AOX1Q06278 1338 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 MAST2Q6P0Q8 1798 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 PDHXO00330 501 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 IRS4O14654 1257 aaPredicted RBP12.39□□□□□ -0.43
CLCN3-208ENST00000512813 MRE11P49959 708 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 TNFAIP1Q13829 316 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 COPS6Q7L5N1 327 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 LTBP2Q14767 1821 aa12.39□□□□□ -0.43
CLCN3-208ENST00000512813 ANXA1P04083 346 aa12.38□□□□□ -0.43
CLCN3-208ENST00000512813 COL6A1P12109 1028 aa12.38□□□□□ -0.43
CLCN3-208ENST00000512813 MRPS5P82675 430 aaKnown RBP12.38□□□□□ -0.43
CLCN3-208ENST00000512813 CFAP100Q494V2 611 aa12.38□□□□□ -0.43
CLCN3-208ENST00000512813 TEPSINQ96N21 525 aa12.38□□□□□ -0.43
CLCN3-208ENST00000512813 OGDHLQ9ULD0 1010 aa12.38□□□□□ -0.43
CLCN3-208ENST00000512813 LRRC26Q2I0M4 334 aa12.37□□□□□ -0.43
CLCN3-208ENST00000512813 TMEM31Q5JXX7 168 aa12.37□□□□□ -0.43
CLCN3-208ENST00000512813 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
CLCN3-208ENST00000512813 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
CLCN3-208ENST00000512813 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
CLCN3-208ENST00000512813 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
CLCN3-208ENST00000512813 PARK7Q99497 189 aaKnown RBP12.37□□□□□ -0.43
CLCN3-208ENST00000512813 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
CLCN3-208ENST00000512813 DNAH12Q6ZR08 3092 aa12.36□□□□□ -0.43
CLCN3-208ENST00000512813 GTF2IP78347 998 aa12.36□□□□□ -0.43
CLCN3-208ENST00000512813 AIMP1Q12904 312 aaKnown RBP12.36□□□□□ -0.43
CLCN3-208ENST00000512813 SHHQ15465 462 aa12.36□□□□□ -0.43
CLCN3-208ENST00000512813 CERS5Q8N5B7 392 aa12.36□□□□□ -0.43
CLCN3-208ENST00000512813 HMGCRP04035 888 aa12.35□□□□□ -0.43
CLCN3-208ENST00000512813 GRIN2CQ14957 1233 aa12.35□□□□□ -0.43
CLCN3-208ENST00000512813 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
CLCN3-208ENST00000512813 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
CLCN3-208ENST00000512813 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
CLCN3-208ENST00000512813 TXNRD3Q86VQ6 643 aa12.35□□□□□ -0.43
CLCN3-208ENST00000512813 ANKRD18AQ8IVF6 992 aa12.35□□□□□ -0.43
CLCN3-208ENST00000512813 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.35□□□□□ -0.43
CLCN3-208ENST00000512813 TNPO2O14787 897 aaKnown RBP12.34□□□□□ -0.43
CLCN3-208ENST00000512813 CCT4P50991 539 aaKnown RBP12.34□□□□□ -0.43
CLCN3-208ENST00000512813 PPATQ06203 517 aa12.34□□□□□ -0.43
CLCN3-208ENST00000512813 C9orf50Q5SZB4 431 aa12.34□□□□□ -0.43
CLCN3-208ENST00000512813 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
CLCN3-208ENST00000512813 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
CLCN3-208ENST00000512813 HSP90B1P14625 803 aaKnown RBP12.33□□□□□ -0.44
CLCN3-208ENST00000512813 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
CLCN3-208ENST00000512813 MOGSQ13724 837 aa12.33□□□□□ -0.44
CLCN3-208ENST00000512813 WRNIP1Q96S55 665 aa12.33□□□□□ -0.44
CLCN3-208ENST00000512813 EPHX3Q9H6B9 360 aa12.33□□□□□ -0.44
CLCN3-208ENST00000512813 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
CLCN3-208ENST00000512813 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 GPR37L1O60883 481 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 CYP2C8P10632 490 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 AKNAD1Q5T1N1 836 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 ZKSCAN4Q969J2 545 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-208ENST00000512813 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
CLCN3-208ENST00000512813 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 KCNH4Q9UQ05 1017 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 SPEF2Q9C093 1822 aa12.32□□□□□ -0.44
CLCN3-208ENST00000512813 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
CLCN3-208ENST00000512813 TRIM28Q13263 835 aaKnown RBP12.31□□□□□ -0.44
CLCN3-208ENST00000512813 ZBTB38Q8NAP3 1195 aaPredicted RBP12.31□□□□□ -0.44
CLCN3-208ENST00000512813 PLBD2Q8NHP8 589 aa12.31□□□□□ -0.44
CLCN3-208ENST00000512813 COA7Q96BR5 231 aa12.31□□□□□ -0.44
CLCN3-208ENST00000512813 TMEM39BQ9GZU3 492 aa12.31□□□□□ -0.44
CLCN3-208ENST00000512813 ZDBF2Q9HCK1 2354 aa12.31□□□□□ -0.44
CLCN3-208ENST00000512813 DLG5Q8TDM6 1919 aa12.31□□□□□ -0.44
CLCN3-208ENST00000512813 DOCK3Q8IZD9 2030 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 XIRP2A4UGR9 3374 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 KLRK1P26718 216 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
CLCN3-208ENST00000512813 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 C11orf16Q9NQ32 467 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
CLCN3-208ENST00000512813 LEMD3Q9Y2U8 911 aa12.3□□□□□ -0.44
CLCN3-208ENST00000512813 U2AF1L5P0DN76 240 aaPredicted RBP12.29□□□□□ -0.44
CLCN3-208ENST00000512813 BMP1P13497 986 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 TNNI2P48788 182 aa12.29□□□□□ -0.44
CLCN3-208ENST00000512813 RBM5P52756 815 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCN3-208ENST00000512813 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCN3-208ENST00000512813 U2AF1Q01081 240 aaKnown RBP eCLIP12.29□□□□□ -0.44
CLCN3-208ENST00000512813 TRIM32Q13049 653 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms