RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 USP47Q96K76 1375 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 BTAF1O14981 1849 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 FAM157BP0CG42 384 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 ADH6P28332 368 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 C1QTNF8P60827 252 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 SNRPNP63162 240 aaKnown RBP6.49□□□□□ -1.37
CAST-237ENST00000512191 CTBSQ01459 385 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 SAMD5Q5TGI4 173 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 RAPGEF4Q8WZA2 1011 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 ALG2Q9H553 416 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 NOP53Q9NZM5 478 aaKnown RBP6.49□□□□□ -1.37
CAST-237ENST00000512191 IQSEC3Q9UPP2 1182 aaPredicted RBP6.49□□□□□ -1.37
CAST-237ENST00000512191 PCDHGA11Q9Y5H2 935 aa6.49□□□□□ -1.37
CAST-237ENST00000512191 GPC6Q9Y625 555 aaPredicted RBP6.49□□□□□ -1.37
CAST-237ENST00000512191 CHD4Q14839 1912 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 CD163L1Q9NR16 1453 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 KIF24Q5T7B8 1368 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 PAPPAQ13219 1627 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 USP17L5A8MUK1 530 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 PIK3CDO00329 1044 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 C2CD2LO14523 706 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 GNB5O14775 395 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 KHNYNO15037 678 aaKnown RBP6.48□□□□□ -1.37
CAST-237ENST00000512191 EPXP11678 715 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 LAMC2Q13753 1193 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 NCOA4Q13772 614 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 BICDL1Q6ZP65 573 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 LTV1Q96GA3 475 aaPredicted RBP6.48□□□□□ -1.37
CAST-237ENST00000512191 SPOCK3Q9BQ16 436 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 CCNL1Q9UK58 526 aaPredicted RBP6.48□□□□□ -1.37
CAST-237ENST00000512191 NSD3Q9BZ95 1437 aa6.48□□□□□ -1.37
CAST-237ENST00000512191 UTRNP46939 3433 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 KAT6BQ8WYB5 2073 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 DCDC2BA2VCK2 349 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 NEURL1BA8MQ27 555 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 MAPTP10636 758 aaKnown RBP6.47□□□□□ -1.37
CAST-237ENST00000512191 HOXC9P31274 260 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 TMF1P82094 1093 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 TNP2Q05952 138 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 C1orf229Q6ZS94 237 aaPredicted RBP6.47□□□□□ -1.37
CAST-237ENST00000512191 ZNF295-AS1Q8N0V1 137 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 SCHIP1Q9P0W5 487 aaPredicted RBP6.47□□□□□ -1.37
CAST-237ENST00000512191 QSER1Q2KHR3 1735 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 MAP3K19Q56UN5 1328 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 PNPLA7Q6ZV29 1317 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 PCDH11XQ9BZA7 1347 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 PCDH11YQ9BZA8 1340 aa6.47□□□□□ -1.37
CAST-237ENST00000512191 TEAD4Q15561 434 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 SMARCC1Q92922 1105 aaPredicted RBP6.46□□□□□ -1.38
CAST-237ENST00000512191 BTBD6Q96KE9 485 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 ZIC5Q96T25 663 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 NEUROD4Q9HD90 331 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 ZNF358Q9NW07 568 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 PRR12Q9ULL5 1215 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 CHMP3Q9Y3E7 222 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 CD2APQ9Y5K6 639 aa6.46□□□□□ -1.38
CAST-237ENST00000512191 ST20-MTHFSA0A0A6YYL1 179 aa6.45□□□□□ -1.38
CAST-237ENST00000512191 CD33P20138 364 aa6.45□□□□□ -1.38
CAST-237ENST00000512191 PLEKHM2Q8IWE5 1019 aa6.45□□□□□ -1.38
CAST-237ENST00000512191 MARK1Q9P0L2 795 aa6.45□□□□□ -1.38
CAST-237ENST00000512191 NSD2O96028 1365 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 FLT4P35916 1363 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 PROCP04070 461 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 DGKGP49619 791 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 GRIN2CQ14957 1233 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 ZNF468Q5VIY5 522 aaPredicted RBP6.44□□□□□ -1.38
CAST-237ENST00000512191 LINC00114Q6XXX2 140 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 CHSY3Q70JA7 882 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.44□□□□□ -1.38
CAST-237ENST00000512191 TESK2Q96S53 571 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 ZNF232Q9UNY5 417 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 SPG7Q9UQ90 795 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 RBM19Q9Y4C8 960 aaKnown RBP6.44□□□□□ -1.38
CAST-237ENST00000512191 USP3Q9Y6I4 520 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 LY75O60449 1722 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 INSRP06213 1382 aa6.44□□□□□ -1.38
CAST-237ENST00000512191 COL24A1Q17RW2 1714 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 DOT1LQ8TEK3 1739 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 SERTM1A2A2V5 107 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 FYB1O15117 783 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 NOS2P35228 1153 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 NBPF6Q5VWK0 638 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 MPRIPQ6WCQ1 1025 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 COL23A1Q86Y22 540 aaPredicted RBP6.43□□□□□ -1.38
CAST-237ENST00000512191 SLC9A9Q8IVB4 645 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 POM121Q96HA1 1249 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 NBPF4Q96M43 638 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 MEGF6O75095 1541 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 PALLDQ8WX93 1383 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 PLEKHG2Q9H7P9 1386 aa6.43□□□□□ -1.38
CAST-237ENST00000512191 KRBA1A5PL33 1030 aa6.42□□□□□ -1.38
CAST-237ENST00000512191 USP17L3A6NCW0 530 aa6.42□□□□□ -1.38
CAST-237ENST00000512191 USP17L4A6NCW7 530 aa6.42□□□□□ -1.38
CAST-237ENST00000512191 EML1O00423 815 aa6.42□□□□□ -1.38
CAST-237ENST00000512191 EFSO43281 561 aa6.42□□□□□ -1.38
CAST-237ENST00000512191 ADAM23O75077 832 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms