RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 GNAT2P19087 354 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 IFNL3Q8IZI9 196 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 TRIM44Q96DX7 344 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 CFAP45Q9UL16 551 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 MBD4O95243 580 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 APPP05067 770 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 UVSSAQ2YD98 709 aa17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 MYO5AQ9Y4I1 1855 aaKnown RBP17.42■□□□□ 0.38
SNCAIP-216ENST00000512146 BTAF1O14981 1849 aa17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 GSG1L2A8MUP6 293 aa17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 SH2B2O14492 632 aaPredicted RBP17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 ZBTB22O15209 634 aa17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 ONECUT3O60422 494 aaPredicted RBP17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 TMEM87BQ96K49 555 aa17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
SNCAIP-216ENST00000512146 GOLGA8BA8MQT2 603 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 ESPNB1AK53 854 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 NKX2-3Q8TAU0 364 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 CCNL1Q9UK58 526 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 RCOR1Q9UKL0 485 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 GNPATO15228 680 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 LIG1P18858 919 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 GJD4Q96KN9 370 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 ARMT1Q9H993 441 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 SRP68Q9UHB9 627 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 NAP1L2Q9ULW6 460 aaPredicted RBP17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
SNCAIP-216ENST00000512146 CLCN1P35523 988 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 SGMS1Q86VZ5 419 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 RNF214Q8ND24 703 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 NAPBQ9H115 298 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 TIAM2Q8IVF5 1701 aa17.39■□□□□ 0.37
SNCAIP-216ENST00000512146 NEDD4P46934 1319 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 ZPR1O75312 459 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 RPS8P62241 208 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 BICDL1Q6ZP65 573 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 RBM43Q6ZSC3 357 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 FBXO33Q7Z6M2 555 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 LCORLQ8N3X6 602 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 DDX19AQ9NUU7 478 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 LRP2BPQ9P2M1 347 aa17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
SNCAIP-216ENST00000512146 SEMA3EO15041 775 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 GTF2E1P29083 439 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 LIFRP42702 1097 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 GYG1P46976 350 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 NBPF5PQ86XG9 351 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 ARHGEF1Q92888 912 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 FAM84BQ96KN1 310 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 MTA3Q9BTC8 594 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 CNNM2Q9H8M5 875 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 A0A1B0GUL6 1792 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 GOLGA6L4A6NEF3 574 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 B4E1Z4 1266 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 CAVIN4Q5BKX8 364 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 AKNAD1Q5T1N1 836 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 APOA5Q6Q788 366 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 STAG1Q8WVM7 1258 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 ZNF396Q96N95 335 aaPredicted RBP17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
SNCAIP-216ENST00000512146 WTIPA6NIX2 430 aaPredicted RBP17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 PRKAB2O43741 272 aa17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 TM4SF1P30408 202 aa17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 NUP62CLQ9H1M0 184 aa17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 LY9Q9HBG7 655 aa17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 ORC3Q9UBD5 711 aaPredicted RBP17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 SLC4A4Q9Y6R1 1079 aa17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 LY75O60449 1722 aa17.36■□□□□ 0.37
SNCAIP-216ENST00000512146 CYP7A1P22680 504 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 KRT23Q9C075 422 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 ANKRD2Q9GZV1 360 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 NID2Q14112 1375 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 CPLX1O14810 134 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 ADGRA1Q86SQ6 560 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 C8orf76Q96K31 380 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
SNCAIP-216ENST00000512146 CLSTN2Q9H4D0 955 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms