RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PICALMQ13492 652 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 JMYQ8N9B5 988 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 HERC5Q9UII4 1024 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 ATP8A2Q9NTI2 1148 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 RABGAP1Q9Y3P9 1069 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 MEGF6O75095 1541 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 ANKRD13AQ8IZ07 590 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 BMP2KQ9NSY1 1161 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 MCM9Q9NXL9 1143 aa11.32□□□□□ -0.6
POLR2J3-215ENST00000511313 ENTPD3O75355 529 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 KIF4AO95239 1232 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 ZNF853P0CG23 659 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 GTF2A2P52657 109 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 CDK5RAP3Q96JB5 506 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 RANBP6O60518 1105 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 PANK1Q8TE04 598 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 PI4KBQ9UBF8 816 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 ADD3Q9UEY8 706 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 NRXN3Q9Y4C0 1643 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 A0A1B0GUL7 405 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 RAD17O75943 681 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 AXDND1Q5T1B0 1012 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 SLC9C2Q5TAH2 1124 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 CYP46A1Q9Y6A2 500 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 GLTPD2A6NH11 291 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 SRGNP10124 158 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 ZNF157P51786 506 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 GBA2Q9HCG7 927 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 WWC3Q9ULE0 1092 aa11.31□□□□□ -0.6
POLR2J3-215ENST00000511313 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 POLRMTO00411 1230 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 ZNF277Q9NRM2 450 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 NOD1Q9Y239 953 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 GOLIM4O00461 696 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 RCSD1Q6JBY9 416 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 CHD1LQ86WJ1 897 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 NCOA7Q8NI08 942 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 SETD1AO15047 1707 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 HUNKP57058 714 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 KCTD2Q14681 263 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 KIAA0825Q8IV33 1275 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 XAGE2Q96GT9 111 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 CEP131Q9UPN4 1083 aa11.3□□□□□ -0.6
POLR2J3-215ENST00000511313 INTS5Q6P9B9 1019 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 SYAP1Q96A49 352 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 TRIM27P14373 513 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 BEND3Q5T5X7 828 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 BLOC1S2Q6QNY1 142 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 APPBP2Q92624 585 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 HHIPL2Q6UWX4 724 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 MICALL2Q8IY33 904 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 COL22A1Q8NFW1 1626 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 SASH1O94885 1247 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 CHRNA5P30532 468 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 DEFB115Q30KQ5 88 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 TNNI3KQ59H18 835 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 RBM28Q9NW13 759 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 FPGT-TNNI3KV9GXZ4 949 aa11.29□□□□□ -0.6
POLR2J3-215ENST00000511313 CCDC155Q8N6L0 562 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 BOLA2Q9H3K6 86 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 TMEM88BA6NKF7 163 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 PIP4K2AP48426 406 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 LNPKQ9C0E8 428 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 HOXC10Q9NYD6 342 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 NR2E3Q9Y5X4 410 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 FMNL1O95466 1100 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 TMEM266Q2M3C6 531 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 FKBP1CQ5VVH2 108 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 HACE1Q8IYU2 909 aa11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 CCDC8Q9H0W5 538 aaPredicted RBP11.28□□□□□ -0.6
POLR2J3-215ENST00000511313 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms