RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 MKI67P46013 3256 aaKnown RBP28.81■■■□□ 2.2
SMAD5-207ENST00000511116 CRKP46108 304 aa28.81■■■□□ 2.2
SMAD5-207ENST00000511116 CRHR2Q13324 411 aa28.81■■■□□ 2.2
SMAD5-207ENST00000511116 OTUD7BQ6GQQ9 843 aa28.81■■■□□ 2.2
SMAD5-207ENST00000511116 CDAN1Q8IWY9 1227 aa28.81■■■□□ 2.2
SMAD5-207ENST00000511116 MS4A4AQ96JQ5 239 aa28.81■■■□□ 2.2
SMAD5-207ENST00000511116 TRIM17Q9Y577 477 aa28.81■■■□□ 2.2
SMAD5-207ENST00000511116 GRIK5Q16478 980 aa28.8■■■□□ 2.2
SMAD5-207ENST00000511116 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.8■■■□□ 2.2
SMAD5-207ENST00000511116 LRRC24Q50LG9 513 aa28.79■■■□□ 2.2
SMAD5-207ENST00000511116 MRPL50Q8N5N7 158 aaKnown RBP28.79■■■□□ 2.2
SMAD5-207ENST00000511116 OPTNQ96CV9 577 aa28.79■■■□□ 2.2
SMAD5-207ENST00000511116 ERO1AQ96HE7 468 aa28.79■■■□□ 2.2
SMAD5-207ENST00000511116 PCDH10Q9P2E7 1040 aa28.79■■■□□ 2.2
SMAD5-207ENST00000511116 RBBP6Q7Z6E9 1792 aaKnown RBP28.78■■■□□ 2.2
SMAD5-207ENST00000511116 TBC1D22AQ8WUA7 517 aa28.78■■■□□ 2.2
SMAD5-207ENST00000511116 MRIQ9BWK5 157 aa28.78■■■□□ 2.2
SMAD5-207ENST00000511116 ELP3Q9H9T3 547 aa28.78■■■□□ 2.2
SMAD5-207ENST00000511116 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.78■■■□□ 2.2
SMAD5-207ENST00000511116 KIF16BQ96L93 1317 aa28.77■■■□□ 2.2
SMAD5-207ENST00000511116 ZNF316A6NFI3 1004 aaPredicted RBP28.77■■■□□ 2.2
SMAD5-207ENST00000511116 PDE8BO95263 885 aa28.77■■■□□ 2.2
SMAD5-207ENST00000511116 INTS3Q68E01 1043 aaKnown RBP28.77■■■□□ 2.2
SMAD5-207ENST00000511116 FAM9BQ8IZU0 186 aa28.77■■■□□ 2.2
SMAD5-207ENST00000511116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.77■■■□□ 2.2
SMAD5-207ENST00000511116 TMEM39BQ9GZU3 492 aa28.77■■■□□ 2.2
SMAD5-207ENST00000511116 KIAA0100Q14667 2235 aaKnown RBP28.77■■■□□ 2.2
SMAD5-207ENST00000511116 PTPRCP08575 1304 aa28.76■■■□□ 2.19
SMAD5-207ENST00000511116 TNNI2P48788 182 aa28.76■■■□□ 2.19
SMAD5-207ENST00000511116 PTPN22Q9Y2R2 807 aa28.76■■■□□ 2.19
SMAD5-207ENST00000511116 TCP10L2B9ZVM9 353 aa28.75■■■□□ 2.19
SMAD5-207ENST00000511116 MAP3K9P80192 1104 aa28.75■■■□□ 2.19
SMAD5-207ENST00000511116 VGLL4Q14135 290 aa28.75■■■□□ 2.19
SMAD5-207ENST00000511116 METTL24Q5JXM2 366 aa28.75■■■□□ 2.19
SMAD5-207ENST00000511116 CD99L2Q8TCZ2 262 aa28.75■■■□□ 2.19
SMAD5-207ENST00000511116 BRCA2P51587 3418 aa28.75■■■□□ 2.19
SMAD5-207ENST00000511116 CAP1Q01518 475 aa28.74■■■□□ 2.19
SMAD5-207ENST00000511116 CAVIN4Q5BKX8 364 aa28.74■■■□□ 2.19
SMAD5-207ENST00000511116 VPS37DQ86XT2 251 aa28.74■■■□□ 2.19
SMAD5-207ENST00000511116 BRI3BPQ8WY22 251 aa28.74■■■□□ 2.19
SMAD5-207ENST00000511116 ARMC5Q96C12 935 aa28.74■■■□□ 2.19
SMAD5-207ENST00000511116 IQSEC3Q9UPP2 1182 aaPredicted RBP28.74■■■□□ 2.19
SMAD5-207ENST00000511116 SUGT1Q9Y2Z0 365 aa28.74■■■□□ 2.19
SMAD5-207ENST00000511116 FGFR2P21802 821 aa28.73■■■□□ 2.19
SMAD5-207ENST00000511116 SP3Q02447 781 aa28.73■■■□□ 2.19
SMAD5-207ENST00000511116 FKBP1CQ5VVH2 108 aa28.73■■■□□ 2.19
SMAD5-207ENST00000511116 CNKSR2Q8WXI2 1034 aa28.73■■■□□ 2.19
SMAD5-207ENST00000511116 ZDHHC15Q96MV8 337 aa28.73■■■□□ 2.19
SMAD5-207ENST00000511116 USP44Q9H0E7 712 aa28.73■■■□□ 2.19
SMAD5-207ENST00000511116 TEKT1Q969V4 418 aa28.72■■■□□ 2.19
SMAD5-207ENST00000511116 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
SMAD5-207ENST00000511116 GTF2A2P52657 109 aa28.71■■■□□ 2.19
SMAD5-207ENST00000511116 CHAF1AQ13111 956 aaPredicted RBP28.71■■■□□ 2.19
SMAD5-207ENST00000511116 FAM83AQ86UY5 434 aa28.71■■■□□ 2.19
SMAD5-207ENST00000511116 EFCC1Q9HA90 598 aa28.71■■■□□ 2.19
SMAD5-207ENST00000511116 POTEFA5A3E0 1075 aa28.7■■■□□ 2.18
SMAD5-207ENST00000511116 SPDYE5A6NIY4 337 aa28.7■■■□□ 2.18
SMAD5-207ENST00000511116 BCAMP50895 628 aa28.7■■■□□ 2.18
SMAD5-207ENST00000511116 APOBEC3HQ6NTF7 200 aaKnown RBP28.7■■■□□ 2.18
SMAD5-207ENST00000511116 RPAP1Q9BWH6 1393 aaPredicted RBP28.7■■■□□ 2.18
SMAD5-207ENST00000511116 KLHDC4Q8TBB5 520 aa28.69■■■□□ 2.18
SMAD5-207ENST00000511116 SSH1Q8WYL5 1049 aa28.69■■■□□ 2.18
SMAD5-207ENST00000511116 CSADQ9Y600 493 aa28.69■■■□□ 2.18
SMAD5-207ENST00000511116 CCL15-CCL14A0A0B4J2E2 113 aa28.68■■■□□ 2.18
SMAD5-207ENST00000511116 RFX5P48382 616 aaPredicted RBP28.68■■■□□ 2.18
SMAD5-207ENST00000511116 PUM3Q15397 648 aaKnown RBP28.68■■■□□ 2.18
SMAD5-207ENST00000511116 CCL15Q16663 113 aa28.68■■■□□ 2.18
SMAD5-207ENST00000511116 HHIPL2Q6UWX4 724 aa28.68■■■□□ 2.18
SMAD5-207ENST00000511116 SNCAIPQ9Y6H5 919 aa28.68■■■□□ 2.18
SMAD5-207ENST00000511116 MAST3O60307 1309 aa28.68■■■□□ 2.18
SMAD5-207ENST00000511116 FRAT2O75474 233 aaPredicted RBP28.67■■■□□ 2.18
SMAD5-207ENST00000511116 CACNB3P54284 484 aa28.67■■■□□ 2.18
SMAD5-207ENST00000511116 FAM43AQ8N2R8 423 aa28.67■■■□□ 2.18
SMAD5-207ENST00000511116 ZCCHC17Q9NP64 241 aaKnown RBP28.67■■■□□ 2.18
SMAD5-207ENST00000511116 E9PSI1 815 aa28.66■■■□□ 2.18
SMAD5-207ENST00000511116 TAF1CQ15572 869 aaPredicted RBP28.66■■■□□ 2.18
SMAD5-207ENST00000511116 OTUD5Q96G74 571 aa28.66■■■□□ 2.18
SMAD5-207ENST00000511116 ZFYVE28Q9HCC9 887 aa28.66■■■□□ 2.18
SMAD5-207ENST00000511116 IFIT1P09914 478 aaKnown RBP28.65■■■□□ 2.18
SMAD5-207ENST00000511116 ERO1BQ86YB8 467 aa28.65■■■□□ 2.18
SMAD5-207ENST00000511116 EYA2O00167 538 aa28.64■■■□□ 2.18
SMAD5-207ENST00000511116 HOOK2Q96ED9 719 aa28.64■■■□□ 2.18
SMAD5-207ENST00000511116 TMOD2Q9NZR1 351 aa28.64■■■□□ 2.18
SMAD5-207ENST00000511116 MYH13Q9UKX3 1938 aa28.63■■■□□ 2.17
SMAD5-207ENST00000511116 WRNIP1Q96S55 665 aa28.63■■■□□ 2.17
SMAD5-207ENST00000511116 CETPP11597 493 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 SLFN5Q08AF3 891 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 ALDH1L2Q3SY69 923 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 ATG9AQ7Z3C6 839 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 WDR66Q8TBY9 1149 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 LPIN2Q92539 896 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 ZNF333Q96JL9 665 aa28.62■■■□□ 2.17
SMAD5-207ENST00000511116 PPIL2Q13356 520 aa28.61■■■□□ 2.17
SMAD5-207ENST00000511116 ARHGEF6Q15052 776 aa28.61■■■□□ 2.17
SMAD5-207ENST00000511116 FBXO3Q9UK99 471 aa28.61■■■□□ 2.17
SMAD5-207ENST00000511116 IRF6O14896 467 aa28.6■■■□□ 2.17
SMAD5-207ENST00000511116 ZBTB22O15209 634 aa28.6■■■□□ 2.17
SMAD5-207ENST00000511116 TLR2O60603 784 aa28.6■■■□□ 2.17
SMAD5-207ENST00000511116 SLC5A1P13866 664 aa28.6■■■□□ 2.17
SMAD5-207ENST00000511116 ZKSCAN4Q969J2 545 aaPredicted RBP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms