RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 TCP10L2B9ZVM9 353 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 PDE8BO95263 885 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 MAP3K9P80192 1104 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 HDLBPQ00341 1268 aaKnown RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 CHAF1AQ13111 956 aaPredicted RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 RABL6Q3YEC7 729 aaPredicted RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 LRRC24Q50LG9 513 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 INTS3Q68E01 1043 aaKnown RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 MRPL50Q8N5N7 158 aaKnown RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 TBC1D22AQ8WUA7 517 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 OPTNQ96CV9 577 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 BICC1Q9H694 974 aaKnown RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 ELP3Q9H9T3 547 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 IQSEC3Q9UPP2 1182 aaPredicted RBP10.48□□□□□ -0.73
TRIO-217ENST00000511019 AOX1Q06278 1338 aa10.48□□□□□ -0.73
TRIO-217ENST00000511019 GJA5P36382 358 aa10.47□□□□□ -0.73
TRIO-217ENST00000511019 CRHR2Q13324 411 aa10.47□□□□□ -0.73
TRIO-217ENST00000511019 PRPF38BQ5VTL8 546 aaKnown RBP10.47□□□□□ -0.73
TRIO-217ENST00000511019 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
TRIO-217ENST00000511019 TEKT1Q969V4 418 aa10.47□□□□□ -0.73
TRIO-217ENST00000511019 TEPSINQ96N21 525 aa10.47□□□□□ -0.73
TRIO-217ENST00000511019 PTPN18Q99952 460 aa10.47□□□□□ -0.73
TRIO-217ENST00000511019 IFIT1P09914 478 aaKnown RBP10.46□□□□□ -0.73
TRIO-217ENST00000511019 BCAMP50895 628 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 SP3Q02447 781 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 ARHGEF6Q15052 776 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 GRIK5Q16478 980 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.46□□□□□ -0.73
TRIO-217ENST00000511019 TMEM39BQ9GZU3 492 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 USP44Q9H0E7 712 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 PTPN22Q9Y2R2 807 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 CSADQ9Y600 493 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 PTPRCP08575 1304 aa10.46□□□□□ -0.73
TRIO-217ENST00000511019 SSC5DA1L4H1 1573 aa10.46□□□□□ -0.74
TRIO-217ENST00000511019 ZNF646O15015 1829 aaPredicted RBP10.46□□□□□ -0.74
TRIO-217ENST00000511019 CACNA1FO60840 1977 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 E9PSI1 815 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 WDHD1O75717 1129 aaPredicted RBP10.45□□□□□ -0.74
TRIO-217ENST00000511019 GTF2A2P52657 109 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 KLHDC4Q8TBB5 520 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 CD99L2Q8TCZ2 262 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 HOOK2Q96ED9 719 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 ZDHHC15Q96MV8 337 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 ZFYVE28Q9HCC9 887 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 TMOD2Q9NZR1 351 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 SUGT1Q9Y2Z0 365 aa10.45□□□□□ -0.74
TRIO-217ENST00000511019 ZNF521Q96K83 1311 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 CCL15-CCL14A0A0B4J2E2 113 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 CACNB3P54284 484 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 VGLL4Q14135 290 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 PUM3Q15397 648 aaKnown RBP10.44□□□□□ -0.74
TRIO-217ENST00000511019 CCL15Q16663 113 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 CDAN1Q8IWY9 1227 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 VGLL2Q8N8G2 317 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRIO-217ENST00000511019 SSH1Q8WYL5 1049 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 OTUD5Q96G74 571 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 PCDH10Q9P2E7 1040 aa10.44□□□□□ -0.74
TRIO-217ENST00000511019 MAST3O60307 1309 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 EYA2O00167 538 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 SLC5A1P13866 664 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 FGFR2P21802 821 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 SLFN5Q08AF3 891 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 TAF1CQ15572 869 aaPredicted RBP10.43□□□□□ -0.74
TRIO-217ENST00000511019 FKBP1CQ5VVH2 108 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 APOBEC3HQ6NTF7 200 aaKnown RBP10.43□□□□□ -0.74
TRIO-217ENST00000511019 HHIPL2Q6UWX4 724 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 FAM83AQ86UY5 434 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 ERO1BQ86YB8 467 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 WDR66Q8TBY9 1149 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 BRI3BPQ8WY22 251 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 LPIN2Q92539 896 aa10.43□□□□□ -0.74
TRIO-217ENST00000511019 KIF16BQ96L93 1317 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 POTEFA5A3E0 1075 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 MYCNP04198 464 aaPredicted RBP10.42□□□□□ -0.74
TRIO-217ENST00000511019 CETPP11597 493 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 DCAF15Q66K64 600 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 NBPF11Q86T75 865 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 ZKSCAN4Q969J2 545 aaPredicted RBP10.42□□□□□ -0.74
TRIO-217ENST00000511019 WRNIP1Q96S55 665 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 TMEM106CQ9BVX2 250 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 HDAC5Q9UQL6 1122 aa10.42□□□□□ -0.74
TRIO-217ENST00000511019 U3KPZ7 1027 aaPredicted RBP10.42□□□□□ -0.74
TRIO-217ENST00000511019 RFX5P48382 616 aaPredicted RBP10.41□□□□□ -0.74
TRIO-217ENST00000511019 SNAPC2Q13487 334 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 KIF22Q14807 665 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 MIGA2Q7L4E1 593 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 FAM43AQ8N2R8 423 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 FAM151AQ8WW52 585 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 ARMC5Q96C12 935 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 ZNF341Q9BYN7 854 aa10.41□□□□□ -0.74
TRIO-217ENST00000511019 GNL3LQ9NVN8 582 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms