RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 TRPM4Q8TD43 1214 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 ZNF296Q8WUU4 475 aaPredicted RBP7.02□□□□□ -1.29
MBD4-209ENST00000511009 NXPE3Q969Y0 559 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 SEC16BQ96JE7 1060 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 HHIPQ96QV1 700 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 PLVAPQ9BX97 442 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 RASSF4Q9H2L5 321 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 NAGPAQ9UK23 515 aa7.02□□□□□ -1.29
MBD4-209ENST00000511009 SUPT16HQ9Y5B9 1047 aaKnown RBP7.02□□□□□ -1.29
MBD4-209ENST00000511009 M0R082 166 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 SMNDC1O75940 238 aaKnown RBP eCLIP7.01□□□□□ -1.29
MBD4-209ENST00000511009 CHRNA4P43681 627 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 NASPP49321 788 aaPredicted RBP7.01□□□□□ -1.29
MBD4-209ENST00000511009 FAM160A1Q05DH4 1040 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 RBL2Q08999 1139 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 CCDC144BQ3MJ40 725 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 TTBK2Q6IQ55 1244 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 NOP9Q86U38 636 aaKnown RBP7.01□□□□□ -1.29
MBD4-209ENST00000511009 CKAP2LQ8IYA6 745 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 ZNF417Q8TAU3 575 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 ZNF587Q96SQ5 575 aaPredicted RBP7.01□□□□□ -1.29
MBD4-209ENST00000511009 DNAJB12Q9NXW2 375 aaKnown RBP7.01□□□□□ -1.29
MBD4-209ENST00000511009 SLC6A14Q9UN76 642 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 TLR6Q9Y2C9 796 aa7.01□□□□□ -1.29
MBD4-209ENST00000511009 FAM177BA6PVY3 158 aa7□□□□□ -1.29
MBD4-209ENST00000511009 C1QTNF9BB2RNN3 333 aa7□□□□□ -1.29
MBD4-209ENST00000511009 ZBTB42B2RXF5 422 aa7□□□□□ -1.29
MBD4-209ENST00000511009 PF4P02776 101 aa7□□□□□ -1.29
MBD4-209ENST00000511009 ALAS2P22557 587 aa7□□□□□ -1.29
MBD4-209ENST00000511009 ATP11AP98196 1134 aa7□□□□□ -1.29
MBD4-209ENST00000511009 RPS26P11Q5JNZ5 115 aaPredicted RBP7□□□□□ -1.29
MBD4-209ENST00000511009 CEP135Q66GS9 1140 aa7□□□□□ -1.29
MBD4-209ENST00000511009 DIEXFQ68CQ4 756 aaKnown RBP7□□□□□ -1.29
MBD4-209ENST00000511009 PHC3Q8NDX5 983 aa7□□□□□ -1.29
MBD4-209ENST00000511009 EAF1Q96JC9 268 aaPredicted RBP7□□□□□ -1.29
MBD4-209ENST00000511009 RHOVQ96L33 236 aa7□□□□□ -1.29
MBD4-209ENST00000511009 NECAB3Q96P71 396 aaPredicted RBP7□□□□□ -1.29
MBD4-209ENST00000511009 ZNF576Q9H609 170 aa7□□□□□ -1.29
MBD4-209ENST00000511009 ZSWIM4Q9H7M6 989 aa7□□□□□ -1.29
MBD4-209ENST00000511009 SEC31BQ9NQW1 1179 aa7□□□□□ -1.29
MBD4-209ENST00000511009 NOP53Q9NZM5 478 aaKnown RBP7□□□□□ -1.29
MBD4-209ENST00000511009 EFR3BQ9Y2G0 817 aa7□□□□□ -1.29
MBD4-209ENST00000511009 SAMM50Q9Y512 469 aa7□□□□□ -1.29
MBD4-209ENST00000511009 NFKBIEO00221 500 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 PIK3R2O00459 728 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 PPP2R3AQ06190 1150 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 FBXL19Q6PCT2 694 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 GOLM1Q8NBJ4 401 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 CPLX3Q8WVH0 158 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 NT5C1AQ9BXI3 368 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
MBD4-209ENST00000511009 ENC1O14682 589 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 HSP90B1P14625 803 aaKnown RBP6.98□□□□□ -1.29
MBD4-209ENST00000511009 CPB1P15086 417 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 ZNF157P51786 506 aaPredicted RBP6.98□□□□□ -1.29
MBD4-209ENST00000511009 LMNB2Q03252 620 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 APOBRQ0VD83 1088 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 CAMK2GQ13555 558 aaPredicted RBP6.98□□□□□ -1.29
MBD4-209ENST00000511009 COL9A2Q14055 689 aaPredicted RBP6.98□□□□□ -1.29
MBD4-209ENST00000511009 GRIK5Q16478 980 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 GIMAP6Q6P9H5 292 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 FAM35AQ86V20 835 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 BSNDQ8WZ55 320 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 NKD1Q969G9 470 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 PUS7Q96PZ0 661 aaKnown RBP6.98□□□□□ -1.29
MBD4-209ENST00000511009 OSBPL2Q9H1P3 480 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 GINM1Q9NU53 330 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 STRIP2Q9ULQ0 834 aa6.98□□□□□ -1.29
MBD4-209ENST00000511009 TMA7Q9Y2S6 64 aaKnown RBP6.98□□□□□ -1.29
MBD4-209ENST00000511009 RPS26P62854 115 aaKnown RBP6.97□□□□□ -1.29
MBD4-209ENST00000511009 PCNX4Q63HM2 1172 aa6.97□□□□□ -1.29
MBD4-209ENST00000511009 AGMOQ6ZNB7 445 aa6.97□□□□□ -1.29
MBD4-209ENST00000511009 POP1Q99575 1024 aaKnown RBP6.97□□□□□ -1.29
MBD4-209ENST00000511009 MUC3BQ9H195 1237 aa6.97□□□□□ -1.29
MBD4-209ENST00000511009 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
MBD4-209ENST00000511009 UBP1Q9NZI7 540 aa6.97□□□□□ -1.29
MBD4-209ENST00000511009 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 PTPRAP18433 802 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 TFE3P19532 575 aaPredicted RBP6.96□□□□□ -1.3
MBD4-209ENST00000511009 BAG6P46379 1132 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 FAAP100Q0VG06 881 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 ELMSAN1Q6PJG2 1045 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 PLD4Q96BZ4 506 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.3
MBD4-209ENST00000511009 MRVI1Q9Y6F6 885 aa6.96□□□□□ -1.3
MBD4-209ENST00000511009 GREM1O60565 184 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 ADAM23O75077 832 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 PAGE1O75459 146 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 GARTP22102 1010 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 AFF1P51825 1210 aaKnown RBP6.95□□□□□ -1.3
MBD4-209ENST00000511009 PCDH1Q08174 1060 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
MBD4-209ENST00000511009 DDX54Q8TDD1 881 aaKnown RBP6.95□□□□□ -1.3
MBD4-209ENST00000511009 JARID2Q92833 1246 aaPredicted RBP6.95□□□□□ -1.3
MBD4-209ENST00000511009 LPIN3Q9BQK8 851 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 ZNF408Q9H9D4 720 aa6.95□□□□□ -1.3
MBD4-209ENST00000511009 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms