RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
PDPN-209ENST00000510906 CCDC85AQ96PX6 553 aaPredicted RBP10.99□□□□□ -0.65
PDPN-209ENST00000510906 MYH16Q9H6N6 1097 aa10.99□□□□□ -0.65
PDPN-209ENST00000510906 NEURL1BA8MQ27 555 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 HSP90B1P14625 803 aaKnown RBP10.98□□□□□ -0.65
PDPN-209ENST00000510906 SCNN1DP51172 638 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 RPS8P62241 208 aaKnown RBP10.98□□□□□ -0.65
PDPN-209ENST00000510906 GPSM2P81274 684 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 NEXNQ0ZGT2 675 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 FKBP5Q13451 457 aaPredicted RBP10.98□□□□□ -0.65
PDPN-209ENST00000510906 CCDC152Q4G0S7 254 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 LDHDQ86WU2 507 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 FAM163AQ96GL9 167 aaPredicted RBP10.98□□□□□ -0.65
PDPN-209ENST00000510906 VPS33BQ9H267 617 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 ZNRF3Q9ULT6 936 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 NSFL1CQ9UNZ2 370 aaKnown RBP10.98□□□□□ -0.65
PDPN-209ENST00000510906 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 CDHR2Q9BYE9 1310 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 DUOX1Q9NRD9 1551 aa10.98□□□□□ -0.65
PDPN-209ENST00000510906 EPS15P42566 896 aa10.97□□□□□ -0.65
PDPN-209ENST00000510906 CXCL9Q07325 125 aa10.97□□□□□ -0.65
PDPN-209ENST00000510906 DNAAF4Q8WXU2 420 aa10.97□□□□□ -0.65
PDPN-209ENST00000510906 GPR101Q96P66 508 aaPredicted RBP10.97□□□□□ -0.65
PDPN-209ENST00000510906 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
PDPN-209ENST00000510906 TAF1P21675 1872 aa10.97□□□□□ -0.65
PDPN-209ENST00000510906 YDJCA8MPS7 323 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 CFAP99D6REC4 459 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 F6X3S4 739 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 C6orf229H3BNL8 230 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 CTSWP56202 376 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 KMT5BQ4FZB7 885 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 UBE3BQ7Z3V4 1068 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 ARID3AQ99856 593 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 POLLQ9UGP5 575 aa10.96□□□□□ -0.65
PDPN-209ENST00000510906 H7C1W4 665 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 ACTN4O43707 911 aaKnown RBP10.95□□□□□ -0.66
PDPN-209ENST00000510906 RNF40O75150 1001 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 RAD17O75943 681 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
PDPN-209ENST00000510906 GCKRQ14397 625 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 WASHC4Q2M389 1173 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 MAP1SQ66K74 1059 aaPredicted RBP10.95□□□□□ -0.66
PDPN-209ENST00000510906 CIAPIN1Q6FI81 312 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 PNMA8AQ86V59 439 aaPredicted RBP10.95□□□□□ -0.66
PDPN-209ENST00000510906 LINS1Q8NG48 757 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 PLSCR2Q9NRY7 297 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 LRRC37AA6NMS7 1700 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 LTBP1Q14766 1721 aa10.95□□□□□ -0.66
PDPN-209ENST00000510906 PASKQ96RG2 1323 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 SCN4AP35499 1836 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 ITGBL1O95965 494 aaPredicted RBP10.94□□□□□ -0.66
PDPN-209ENST00000510906 GMPSP49915 693 aaPredicted RBP10.94□□□□□ -0.66
PDPN-209ENST00000510906 CASP7P55210 303 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 MORN1Q5T089 497 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 ANKRD18AQ8IVF6 992 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
PDPN-209ENST00000510906 GREM2Q9H772 168 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.94□□□□□ -0.66
PDPN-209ENST00000510906 PODXL2Q9NZ53 605 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 GPRC5DQ9NZD1 345 aa10.94□□□□□ -0.66
PDPN-209ENST00000510906 GPR37L1O60883 481 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 UFL1O94874 794 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 CTDSPL2Q05D32 466 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 TNIP1Q15025 636 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 CNTROBQ8N137 903 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 CDC5LQ99459 802 aaKnown RBP10.93□□□□□ -0.66
PDPN-209ENST00000510906 EYA3Q99504 573 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 PRM3Q9NNZ6 103 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 HMX1Q9NP08 348 aaPredicted RBP10.93□□□□□ -0.66
PDPN-209ENST00000510906 ANKIB1Q9P2G1 1089 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
PDPN-209ENST00000510906 RTL9Q8NET4 1388 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 SHTN1A0MZ66 631 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 WTIPA6NIX2 430 aaPredicted RBP10.92□□□□□ -0.66
PDPN-209ENST00000510906 PSMD14O00487 310 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 ECE2O60344 883 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 BEND3Q5T5X7 828 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 USP50Q70EL3 339 aaPredicted RBP10.92□□□□□ -0.66
PDPN-209ENST00000510906 PRR14Q9BWN1 585 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 BCL2L13Q9BXK5 485 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 TRIM34Q9BYJ4 488 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 KCNQ5Q9NR82 932 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 GGA1Q9UJY5 639 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 NDUFB9Q9Y6M9 179 aa10.92□□□□□ -0.66
PDPN-209ENST00000510906 XDHP47989 1333 aa10.91□□□□□ -0.66
PDPN-209ENST00000510906 E9PSI1 815 aa10.91□□□□□ -0.66
PDPN-209ENST00000510906 CCER2I3L3R5 266 aa10.91□□□□□ -0.66
PDPN-209ENST00000510906 HSPA1AP0DMV8 641 aaKnown RBP10.91□□□□□ -0.66
PDPN-209ENST00000510906 HSPA1BP0DMV9 641 aaKnown RBP10.91□□□□□ -0.66
PDPN-209ENST00000510906 FMR1Q06787 632 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDPN-209ENST00000510906 SLFN5Q08AF3 891 aa10.91□□□□□ -0.66
PDPN-209ENST00000510906 ZC3H12CQ9C0D7 883 aaKnown RBP10.91□□□□□ -0.66
PDPN-209ENST00000510906 ADARB2Q9NS39 739 aaKnown RBP10.91□□□□□ -0.66
PDPN-209ENST00000510906 BSDC1Q9NW68 430 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms