RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ATP6V1AP38606 617 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 PPP1R2P41236 205 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 CALCOCO2Q13137 446 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 PPP1R7Q15435 360 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 ZBTB9Q96C00 473 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 TCHPQ9BT92 498 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 MTUS1Q9ULD2 1270 aa11.93□□□□□ -0.5
NEK1-206ENST00000510533 IGSF3O75054 1194 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 CPA1P15085 419 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 U2AF2P26368 475 aaKnown RBP eCLIP11.92□□□□□ -0.5
NEK1-206ENST00000510533 FMNL3Q8IVF7 1028 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 PLIN2Q99541 437 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 KCNK9Q9NPC2 374 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 FLT4P35916 1363 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 TRIM14Q14142 442 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 RILPL1Q5EBL4 403 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 CCDC25Q86WR0 208 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 MSH6P52701 1360 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 VWA3AA6NCI4 1184 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 ZBTB7BO15156 539 aaPredicted RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 PLCG2P16885 1265 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 CCT6AP40227 531 aaKnown RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 SETDB1Q15047 1291 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 IGSF22Q8N9C0 903 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 ATP2A2P16615 1042 aaKnown RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 RPL13P26373 211 aaKnown RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 TERF1P54274 439 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 TUBB2AQ13885 445 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 TMEM87AQ8NBN3 555 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 UBLCP1Q8WVY7 318 aaPredicted RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 NAPGQ99747 312 aaPredicted RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 TUBB2BQ9BVA1 445 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 CLSTN2Q9H4D0 955 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 BICC1Q9H694 974 aaKnown RBP11.92□□□□□ -0.5
NEK1-206ENST00000510533 CTNND2Q9UQB3 1225 aa11.92□□□□□ -0.5
NEK1-206ENST00000510533 CCDC160A6NGH7 325 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 PPM1FP49593 454 aaPredicted RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 RAPGEF1Q13905 1077 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 SV2BQ7L1I2 683 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 CCDC26Q8TAB7 109 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 PUS7Q96PZ0 661 aaKnown RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 ZNF174Q15697 407 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 DAAM2Q86T65 1068 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 C10orf67Q8IYJ2 551 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 RAB3IL1Q8TBN0 382 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 JAKMIP2Q96AA8 810 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 HDAC9Q9UKV0 1011 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 TTF2Q9UNY4 1162 aaKnown RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 IRS4O14654 1257 aaPredicted RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 ARL1P40616 181 aaPredicted RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 PLCD1P51178 756 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 CCDC65Q8IXS2 484 aa11.91□□□□□ -0.5
NEK1-206ENST00000510533 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 LLPHQ9BRT6 129 aaKnown RBP11.91□□□□□ -0.5
NEK1-206ENST00000510533 ZFYVE9O95405 1425 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
NEK1-206ENST00000510533 DZIP3Q86Y13 1208 aaKnown RBP11.9□□□□□ -0.5
NEK1-206ENST00000510533 ZNF354CQ86Y25 554 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 NFATC2IPQ8NCF5 419 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 MSANTD4Q8NCY6 345 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 AFAP1L1Q8TED9 768 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 PHACTR3Q96KR7 559 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
NEK1-206ENST00000510533 SLC27A2O14975 620 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 TBC1D8BQ0IIM8 1120 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 DCAF17Q5H9S7 520 aaPredicted RBP11.9□□□□□ -0.5
NEK1-206ENST00000510533 RASSF4Q9H2L5 321 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 STIM2Q9P246 746 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 TNRQ92752 1358 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 CYP26C1Q6V0L0 522 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 SMAP1Q8IYB5 467 aaPredicted RBP11.9□□□□□ -0.5
NEK1-206ENST00000510533 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 CEP83Q9Y592 693 aa11.9□□□□□ -0.5
NEK1-206ENST00000510533 TRAF5O00463 557 aa11.9□□□□□ -0.51
NEK1-206ENST00000510533 NYXQ9GZU5 481 aa11.9□□□□□ -0.51
NEK1-206ENST00000510533 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 ZNF75DP51815 510 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 VWA3BQ502W6 1294 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 ZKSCAN3Q9BRR0 538 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 DDX23Q9BUQ8 820 aaKnown RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 TXNDC16Q9P2K2 825 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 MBD4O95243 580 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 DEXIO95424 95 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 FANCCQ00597 558 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 TMEM87BQ96K49 555 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 NAP1L3Q99457 506 aaPredicted RBP11.89□□□□□ -0.51
NEK1-206ENST00000510533 VPS16Q9H269 839 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 NKIRAS1Q9NYS0 192 aa11.89□□□□□ -0.51
NEK1-206ENST00000510533 ANAPC4Q9UJX5 808 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms