RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 ADH5P11766 374 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 MZF1P28698 734 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 DNM1Q05193 864 aaKnown RBP4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 ZNF792Q3KQV3 632 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 CYP27C1Q4G0S4 372 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 ZNF765Q7L2R6 523 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 KSR1Q8IVT5 923 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 ASAP3Q8TDY4 903 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 BCL7CQ8WUZ0 217 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 TMEM40Q8WWA1 233 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 EDEM1Q92611 657 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 GATA6Q92908 595 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 HHIPQ96QV1 700 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 SLC38A3Q99624 504 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 ZKSCAN3Q9BRR0 538 aa4.04□□□□□ -1.76
HMGB3P3-201ENST00000510526 NFICP08651 508 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 EHHADHQ08426 723 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 NOM1Q5C9Z4 860 aaKnown RBP4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 ALKBH2Q6NS38 261 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 ATCAYQ86WG3 371 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 DDX54Q8TDD1 881 aaKnown RBP4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 STK32AQ8WU08 396 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 CHRDQ9H2X0 955 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 ACTL7BQ9Y614 415 aa4.03□□□□□ -1.76
HMGB3P3-201ENST00000510526 PHACTR2O75167 634 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 ATG7O95352 703 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 PDGFAP04085 211 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 RAB6AP20340 208 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 USP5P45974 858 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 ZNF124Q15973 351 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 OGFOD3Q6PK18 319 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 SPOCD1Q6ZMY3 1216 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 DYMQ7RTS9 669 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 BHLHE22Q8NFJ8 381 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 HELQQ8TDG4 1101 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 SNX29Q8TEQ0 813 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 GGNBP2Q9H3C7 697 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 SEMA6CQ9H3T2 930 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 ACSS3Q9H6R3 686 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 RAD18Q9NS91 495 aa4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P3-201ENST00000510526 EREGO14944 169 aa4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 POU4F3Q15319 338 aa4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 NETO1Q8TDF5 533 aa4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 FAM168AQ92567 244 aa4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 NRSN2Q9GZP1 204 aa4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 CLEC4MQ9H2X3 399 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 CARMIL2Q6F5E8 1435 aa4.01□□□□□ -1.77
HMGB3P3-201ENST00000510526 SYNGAP1Q96PV0 1343 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 TNFRSF21O75509 655 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 FUT4P22083 530 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 ATP2B4P23634 1241 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 MAOBP27338 520 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 ASPAP45381 313 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 HNRNPUQ00839 825 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P3-201ENST00000510526 PCDH1Q08174 1060 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 AKAP4Q5JQC9 854 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 TMEM164Q5U3C3 297 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 SEZ6L2Q6UXD5 910 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 SPRED2Q7Z698 418 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 GLIS3Q8NEA6 775 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 FAM84AQ96KN4 292 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 CORO1BQ9BR76 489 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 GSX1Q9H4S2 264 aaPredicted RBP4□□□□□ -1.77
HMGB3P3-201ENST00000510526 RC3H2Q9HBD1 1191 aaKnown RBP4□□□□□ -1.77
HMGB3P3-201ENST00000510526 FAM53CQ9NYF3 392 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 SEPT3Q9UH03 358 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 VAV3Q9UKW4 847 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 ZNF777Q9ULD5 760 aaPredicted RBP4□□□□□ -1.77
HMGB3P3-201ENST00000510526 AMOTL2Q9Y2J4 779 aa4□□□□□ -1.77
HMGB3P3-201ENST00000510526 A6NHS1 94 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 EIF1AXP47813 144 aaKnown RBP3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 TMEM132AQ24JP5 1023 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 ZNF574Q6ZN55 896 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 PI4K2BQ8TCG2 481 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 C1GALT1Q9NS00 363 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 FAM105AQ9NUU6 356 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 AP4E1Q9UPM8 1137 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 DAGLAQ9Y4D2 1042 aa3.99□□□□□ -1.77
HMGB3P3-201ENST00000510526 A0A096LPE4 126 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 A0A1W2PPZ6 126 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 CD8BP10966 210 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 SRPK2P78362 688 aaKnown RBP3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 PRKCQQ04759 706 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 AAMPQ13685 434 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 PEAR1Q5VY43 1037 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 TOX2Q96NM4 488 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 MKNK2Q9HBH9 465 aa3.98□□□□□ -1.77
HMGB3P3-201ENST00000510526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 RNASE1P07998 156 aaKnown RBP3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 BNIP3Q12983 259 aa3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 IFI16Q16666 785 aaKnown RBP3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 WFDC3Q8IUB2 231 aa3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 CCNJLQ8IV13 435 aa3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
HMGB3P3-201ENST00000510526 MBNL3Q9NUK0 354 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms