RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 ZNF468Q5VIY5 522 aaPredicted RBP11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 FOXR1Q6PIV2 292 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 HFE2Q6ZVN8 426 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 HNRNPLLQ8WVV9 542 aaKnown RBP11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 SRPK1Q96SB4 655 aaKnown RBP11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 PRR12Q9ULL5 1215 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 SOX13Q9UN79 622 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 PCDHB5Q9Y5E4 795 aa11.74□□□□□ -0.53
SPOCK1-207ENST00000509978 EIF6P56537 245 aaKnown RBP11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 PCDH1Q08174 1060 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 RASA3Q14644 834 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 ZNF423Q2M1K9 1284 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 SYT9Q86SS6 491 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 TRERF1Q96PN7 1200 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 PPT2Q9UMR5 302 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 MSRB2Q9Y3D2 182 aa11.73□□□□□ -0.53
SPOCK1-207ENST00000509978 CECR2Q9BXF3 1484 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 GFRA3O60609 400 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 IMPDH2P12268 514 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 ARNTP27540 789 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 RASIP1Q5U651 963 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 CEP135Q66GS9 1140 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 VN1R5Q7Z5H4 357 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 FBXO27Q8NI29 283 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 DEPDC7Q96QD5 511 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 EMILIN2Q9BXX0 1053 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 UBE2OQ9C0C9 1292 aaKnown RBP11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 SNTG2Q9NY99 539 aa11.72□□□□□ -0.53
SPOCK1-207ENST00000509978 SMAD7O15105 426 aaKnown RBP11.71□□□□□ -0.53
SPOCK1-207ENST00000509978 PTPRAP18433 802 aa11.71□□□□□ -0.53
SPOCK1-207ENST00000509978 RBBP8NLQ8NC74 664 aaPredicted RBP11.71□□□□□ -0.53
SPOCK1-207ENST00000509978 CC2D2AQ9P2K1 1620 aa11.71□□□□□ -0.54
SPOCK1-207ENST00000509978 EIF2AK2P19525 551 aaKnown RBP11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 REC114Q7Z4M0 266 aa11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 SULF2Q8IWU5 870 aa11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 PLD4Q96BZ4 506 aa11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 RNPC3Q96LT9 517 aaKnown RBP11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 CRBNQ96SW2 442 aa11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
SPOCK1-207ENST00000509978 TLR3O15455 904 aaKnown RBP11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 ZNF157P51786 506 aaPredicted RBP11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 LLGL2Q6P1M3 1020 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 CCDC81Q6ZN84 652 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 EHMT1Q9H9B1 1298 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 FRRS1LQ9P0K9 344 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 NACADO15069 1562 aa11.69□□□□□ -0.54
SPOCK1-207ENST00000509978 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 ZNF252P-AS1Q0IIN9 211 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 FAM169BQ8N8A8 192 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 DDX54Q8TDD1 881 aaKnown RBP11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 TTC9Q92623 222 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 TRIM47Q96LD4 638 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 FERD3LQ96RJ6 166 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
SPOCK1-207ENST00000509978 FAM221BA6H8Z2 402 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 C2CD2LO14523 706 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 ESRRAP11474 423 aaPredicted RBP11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 MCM4P33991 863 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 SEPT6Q14141 434 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 LAPTM4AQ15012 233 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 GAL3ST3Q96A11 431 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 SLC6A14Q9UN76 642 aa11.67□□□□□ -0.54
SPOCK1-207ENST00000509978 ADARB2-AS1A8MUL3 147 aa11.66□□□□□ -0.54
SPOCK1-207ENST00000509978 EIF4EBP3O60516 100 aaPredicted RBP11.66□□□□□ -0.54
SPOCK1-207ENST00000509978 ATE1O95260 518 aa11.66□□□□□ -0.54
SPOCK1-207ENST00000509978 BPNT1O95861 308 aa11.66□□□□□ -0.54
SPOCK1-207ENST00000509978 PERM1Q5SV97 790 aa11.66□□□□□ -0.54
SPOCK1-207ENST00000509978 STK35Q8TDR2 534 aa11.66□□□□□ -0.54
SPOCK1-207ENST00000509978 TRIM37O94972 964 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 CPB1P15086 417 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 CASP7P55210 303 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 RPL6Q02878 288 aaKnown RBP11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 DDR2Q16832 855 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 PLEKHG4Q58EX7 1191 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 ADAMTSL4Q6UY14 1074 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 PDZD3Q86UT5 571 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 NANOS1Q8WY41 292 aaKnown RBP11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 MDFIQ99750 246 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 BRINP2Q9C0B6 783 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 CACNA2D2Q9NY47 1150 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 ACTR10Q9NZ32 417 aa11.65□□□□□ -0.54
SPOCK1-207ENST00000509978 BMP4P12644 408 aa11.64□□□□□ -0.55
SPOCK1-207ENST00000509978 CLCQ05315 142 aa11.64□□□□□ -0.55
SPOCK1-207ENST00000509978 AP3B2Q13367 1082 aa11.64□□□□□ -0.55
SPOCK1-207ENST00000509978 ELMSAN1Q6PJG2 1045 aa11.64□□□□□ -0.55
SPOCK1-207ENST00000509978 GRIN3AQ8TCU5 1115 aa11.64□□□□□ -0.55
SPOCK1-207ENST00000509978 SOX17Q9H6I2 414 aaPredicted RBP11.64□□□□□ -0.55
SPOCK1-207ENST00000509978 TBC1D8BQ0IIM8 1120 aa11.63□□□□□ -0.55
SPOCK1-207ENST00000509978 CELF2-AS1Q8N7Q2 184 aa11.63□□□□□ -0.55
SPOCK1-207ENST00000509978 LPIN3Q9BQK8 851 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms