RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-222ENST00000509774 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
PTPN20-222ENST00000509774 HS6ST3Q8IZP7 471 aa12.95□□□□□ -0.34
PTPN20-222ENST00000509774 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
PTPN20-222ENST00000509774 SRCIN1Q9C0H9 1055 aa12.95□□□□□ -0.34
PTPN20-222ENST00000509774 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
PTPN20-222ENST00000509774 BBOX1O75936 387 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 MS4A1P11836 297 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 CCT4P50991 539 aaKnown RBP12.94□□□□□ -0.34
PTPN20-222ENST00000509774 SCARF1Q14162 830 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 GCKRQ14397 625 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 PRAMEF18Q5VWM3 479 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 ERO1AQ96HE7 468 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 YTHDC1Q96MU7 727 aaKnown RBP12.94□□□□□ -0.34
PTPN20-222ENST00000509774 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
PTPN20-222ENST00000509774 ZNF646O15015 1829 aaPredicted RBP12.94□□□□□ -0.34
PTPN20-222ENST00000509774 VCANP13611 3396 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 F6X3S4 739 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 H7C1W4 665 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 BCAR3O75815 825 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 ATF7IPQ6VMQ6 1270 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 RCAN3Q9UKA8 241 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
PTPN20-222ENST00000509774 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-222ENST00000509774 ZNF280AP59817 542 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-222ENST00000509774 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN20-222ENST00000509774 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
PTPN20-222ENST00000509774 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-222ENST00000509774 WASHC4Q2M389 1173 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 CWF19L2Q2TBE0 894 aaKnown RBP12.92□□□□□ -0.34
PTPN20-222ENST00000509774 SLC4A8Q2Y0W8 1093 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 SPRYD7Q5W111 196 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 ZKSCAN2Q63HK3 967 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 DPF3Q92784 378 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
PTPN20-222ENST00000509774 IRS4O14654 1257 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-222ENST00000509774 ECE2O60344 883 aa12.91□□□□□ -0.34
PTPN20-222ENST00000509774 PDE8AO60658 829 aa12.91□□□□□ -0.34
PTPN20-222ENST00000509774 SF3B3Q15393 1217 aaKnown RBP12.91□□□□□ -0.34
PTPN20-222ENST00000509774 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-222ENST00000509774 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
PTPN20-222ENST00000509774 A0A1W2PPC1 479 aa12.9□□□□□ -0.34
PTPN20-222ENST00000509774 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
PTPN20-222ENST00000509774 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
PTPN20-222ENST00000509774 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
PTPN20-222ENST00000509774 SLC9C1Q4G0N8 1177 aa12.9□□□□□ -0.34
PTPN20-222ENST00000509774 FRAT1Q92837 279 aaPredicted RBP12.9□□□□□ -0.34
PTPN20-222ENST00000509774 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
PTPN20-222ENST00000509774 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.34
PTPN20-222ENST00000509774 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
PTPN20-222ENST00000509774 COL4A1P02462 1669 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 UTYO14607 1347 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 GRM8O00222 908 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 HCLS1P14317 486 aaPredicted RBP12.89□□□□□ -0.35
PTPN20-222ENST00000509774 TRIM27P14373 513 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 CASP7P55210 303 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 PRDM6Q9NQX0 595 aa12.89□□□□□ -0.35
PTPN20-222ENST00000509774 ALPK3Q96L96 1907 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 SPTBN5Q9NRC6 3674 aaKnown RBP12.88□□□□□ -0.35
PTPN20-222ENST00000509774 MANSC4A6NHS7 340 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-222ENST00000509774 PBX2P40425 430 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 CRHR2Q13324 411 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 GRAPQ13588 217 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 CCDC152Q4G0S7 254 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 TMC4Q7Z404 712 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-222ENST00000509774 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
PTPN20-222ENST00000509774 CSF1RP07333 972 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 INHBEP58166 350 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 SP3Q02447 781 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
PTPN20-222ENST00000509774 Q7L0L9 218 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 UBE3BQ7Z3V4 1068 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPN20-222ENST00000509774 DZIP1LQ8IYY4 767 aaKnown RBP12.87□□□□□ -0.35
PTPN20-222ENST00000509774 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 USP44Q9H0E7 712 aa12.87□□□□□ -0.35
PTPN20-222ENST00000509774 TTC28Q96AY4 2481 aa12.86□□□□□ -0.35
PTPN20-222ENST00000509774 ZBTB7BO15156 539 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-222ENST00000509774 GNAI3P08754 354 aa12.86□□□□□ -0.35
PTPN20-222ENST00000509774 PDE3AQ14432 1141 aa12.86□□□□□ -0.35
PTPN20-222ENST00000509774 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
PTPN20-222ENST00000509774 UBE2Q1Q7Z7E8 422 aa12.86□□□□□ -0.35
PTPN20-222ENST00000509774 FTSJ3Q8IY81 847 aaKnown RBP12.86□□□□□ -0.35
PTPN20-222ENST00000509774 TTLL11Q8NHH1 800 aa12.86□□□□□ -0.35
PTPN20-222ENST00000509774 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
PTPN20-222ENST00000509774 MYOZ2Q9NPC6 264 aa12.86□□□□□ -0.35
PTPN20-222ENST00000509774 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
PTPN20-222ENST00000509774 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
PTPN20-222ENST00000509774 CTSWP56202 376 aa12.85□□□□□ -0.35
PTPN20-222ENST00000509774 PRKG1Q13976 671 aa12.85□□□□□ -0.35
PTPN20-222ENST00000509774 NBPF9Q3BBW0 867 aa12.85□□□□□ -0.35
PTPN20-222ENST00000509774 AGBL3Q8NEM8 1001 aa12.85□□□□□ -0.35
PTPN20-222ENST00000509774 SH3TC2Q8TF17 1288 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms