RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ARMC9Q7Z3E5 817 aa22.35■■□□□ 1.17
TPM3-220ENST00000509601 MRIQ9BWK5 157 aa22.35■■□□□ 1.17
TPM3-220ENST00000509601 PPP2R3BQ9Y5P8 575 aa22.35■■□□□ 1.17
TPM3-220ENST00000509601 RASA3Q14644 834 aa22.34■■□□□ 1.17
TPM3-220ENST00000509601 MAP3K11Q16584 847 aa22.34■■□□□ 1.17
TPM3-220ENST00000509601 ANGEL1Q9UNK9 670 aaKnown RBP22.34■■□□□ 1.17
TPM3-220ENST00000509601 COL1A1P02452 1464 aaPredicted RBP22.34■■□□□ 1.17
TPM3-220ENST00000509601 ATP2B3Q16720 1220 aa22.33■■□□□ 1.17
TPM3-220ENST00000509601 ZKSCAN2Q63HK3 967 aa22.33■■□□□ 1.17
TPM3-220ENST00000509601 REM2Q8IYK8 340 aaPredicted RBP22.33■■□□□ 1.17
TPM3-220ENST00000509601 CASP8AP2Q9UKL3 1982 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 ECM29Q5VYK3 1845 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 SRGAP3O43295 1099 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 TRPA1O75762 1119 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 SUPT20HL1Q3ZLR7 823 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 TMEM57Q8N5G2 664 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 SAGE1Q9NXZ1 904 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 SUGT1Q9Y2Z0 365 aa22.32■■□□□ 1.16
TPM3-220ENST00000509601 SSC5DA1L4H1 1573 aa22.31■■□□□ 1.16
TPM3-220ENST00000509601 USP2O75604 605 aaPredicted RBP22.31■■□□□ 1.16
TPM3-220ENST00000509601 GNAI2P04899 355 aa22.31■■□□□ 1.16
TPM3-220ENST00000509601 TIMM10P62072 90 aa22.3■■□□□ 1.16
TPM3-220ENST00000509601 APOBEC3HQ6NTF7 200 aaKnown RBP22.3■■□□□ 1.16
TPM3-220ENST00000509601 WDR66Q8TBY9 1149 aa22.3■■□□□ 1.16
TPM3-220ENST00000509601 TEPSINQ96N21 525 aa22.3■■□□□ 1.16
TPM3-220ENST00000509601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.3■■□□□ 1.16
TPM3-220ENST00000509601 ZBED9Q6R2W3 1325 aa22.3■■□□□ 1.16
TPM3-220ENST00000509601 ZBTB22O15209 634 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 PPP1R12BO60237 982 aaPredicted RBP22.29■■□□□ 1.16
TPM3-220ENST00000509601 ADORA1P30542 326 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 TM4SF4P48230 202 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 HHIPL2Q6UWX4 724 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 CDAN1Q8IWY9 1227 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 TEKT1Q969V4 418 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 ZDHHC15Q96MV8 337 aa22.29■■□□□ 1.16
TPM3-220ENST00000509601 PNMA6EA0A0J9YXQ4 647 aa22.28■■□□□ 1.16
TPM3-220ENST00000509601 TCP10L2B9ZVM9 353 aa22.28■■□□□ 1.16
TPM3-220ENST00000509601 PHKA1P46020 1223 aa22.28■■□□□ 1.16
TPM3-220ENST00000509601 MKRN3Q13064 507 aaKnown RBP22.28■■□□□ 1.16
TPM3-220ENST00000509601 ARAP2Q8WZ64 1704 aa22.28■■□□□ 1.16
TPM3-220ENST00000509601 TFCP2Q12800 502 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 TNFAIP1Q13829 316 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 SPRYD7Q5W111 196 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 CCDC102BQ68D86 513 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 SLC10A4Q96EP9 437 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 CLMNQ96JQ2 1002 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 TMEM39BQ9GZU3 492 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 GNL3LQ9NVN8 582 aaKnown RBP22.27■■□□□ 1.16
TPM3-220ENST00000509601 AKAP11Q9UKA4 1901 aa22.27■■□□□ 1.16
TPM3-220ENST00000509601 UNCXA6NJT0 531 aa22.26■■□□□ 1.15
TPM3-220ENST00000509601 ABHD8Q96I13 439 aa22.26■■□□□ 1.15
TPM3-220ENST00000509601 RLBP1P12271 317 aa22.25■■□□□ 1.15
TPM3-220ENST00000509601 CACNB3P54284 484 aa22.25■■□□□ 1.15
TPM3-220ENST00000509601 DENND2AQ9ULE3 1009 aa22.25■■□□□ 1.15
TPM3-220ENST00000509601 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
TPM3-220ENST00000509601 SEMA3EO15041 775 aa22.24■■□□□ 1.15
TPM3-220ENST00000509601 ZBTB7BO15156 539 aaPredicted RBP22.24■■□□□ 1.15
TPM3-220ENST00000509601 PRDX5P30044 214 aa22.24■■□□□ 1.15
TPM3-220ENST00000509601 IREB2P48200 963 aaKnown RBP22.24■■□□□ 1.15
TPM3-220ENST00000509601 XAGE2Q96GT9 111 aa22.24■■□□□ 1.15
TPM3-220ENST00000509601 MAST3O60307 1309 aa22.24■■□□□ 1.15
TPM3-220ENST00000509601 SALL1Q9NSC2 1324 aa22.24■■□□□ 1.15
TPM3-220ENST00000509601 TNNI2P48788 182 aa22.23■■□□□ 1.15
TPM3-220ENST00000509601 ATP8B2P98198 1209 aa22.23■■□□□ 1.15
TPM3-220ENST00000509601 POLA2Q14181 598 aa22.23■■□□□ 1.15
TPM3-220ENST00000509601 FKBP1CQ5VVH2 108 aa22.23■■□□□ 1.15
TPM3-220ENST00000509601 MCOLN1Q9GZU1 580 aa22.23■■□□□ 1.15
TPM3-220ENST00000509601 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.23■■□□□ 1.15
TPM3-220ENST00000509601 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
TPM3-220ENST00000509601 DIXDC1Q155Q3 683 aa22.22■■□□□ 1.15
TPM3-220ENST00000509601 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
TPM3-220ENST00000509601 DAGLAQ9Y4D2 1042 aa22.22■■□□□ 1.15
TPM3-220ENST00000509601 TBC1D8O95759 1140 aa22.21■■□□□ 1.15
TPM3-220ENST00000509601 LDHBP07195 334 aaKnown RBP22.21■■□□□ 1.15
TPM3-220ENST00000509601 GJA5P36382 358 aa22.21■■□□□ 1.15
TPM3-220ENST00000509601 G3BP1Q13283 466 aaKnown RBP eCLIP22.21■■□□□ 1.158e-7■■□□□ 13.8
TPM3-220ENST00000509601 FAM83AQ86UY5 434 aa22.21■■□□□ 1.15
TPM3-220ENST00000509601 ANKRD13AQ8IZ07 590 aa22.21■■□□□ 1.15
TPM3-220ENST00000509601 ZBTB48P10074 688 aaPredicted RBP22.2■■□□□ 1.14
TPM3-220ENST00000509601 SREBF2Q12772 1141 aa22.2■■□□□ 1.14
TPM3-220ENST00000509601 DGKZQ13574 1117 aa22.2■■□□□ 1.14
TPM3-220ENST00000509601 RASGRF1Q13972 1273 aa22.2■■□□□ 1.14
TPM3-220ENST00000509601 CDC42EP5Q6NZY7 148 aa22.2■■□□□ 1.14
TPM3-220ENST00000509601 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.2■■□□□ 1.14
TPM3-220ENST00000509601 SSH3Q8TE77 659 aa22.2■■□□□ 1.14
TPM3-220ENST00000509601 NEUROD6Q96NK8 337 aa22.2■■□□□ 1.14
TPM3-220ENST00000509601 INHBEP58166 350 aa22.19■■□□□ 1.14
TPM3-220ENST00000509601 MAP3K9P80192 1104 aa22.19■■□□□ 1.14
TPM3-220ENST00000509601 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
TPM3-220ENST00000509601 R3HDMLQ9H3Y0 253 aa22.19■■□□□ 1.14
TPM3-220ENST00000509601 C1orf115Q9H7X2 142 aa22.19■■□□□ 1.14
TPM3-220ENST00000509601 MYH13Q9UKX3 1938 aa22.19■■□□□ 1.14
TPM3-220ENST00000509601 MANSC4A6NHS7 340 aaPredicted RBP22.18■■□□□ 1.14
TPM3-220ENST00000509601 MVPQ14764 893 aaKnown RBP22.18■■□□□ 1.14
TPM3-220ENST00000509601 ITPRIPQ8IWB1 547 aa22.18■■□□□ 1.14
TPM3-220ENST00000509601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.18■■□□□ 1.14
TPM3-220ENST00000509601 CFHR5Q9BXR6 569 aa22.18■■□□□ 1.14
TPM3-220ENST00000509601 TMOD2Q9NZR1 351 aa22.18■■□□□ 1.14
TPM3-220ENST00000509601 PDS5AQ29RF7 1337 aaKnown RBP22.17■■□□□ 1.14
TPM3-220ENST00000509601 ELP3Q9H9T3 547 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms