RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 TCP10L2B9ZVM9 353 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 VGLL4Q14135 290 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 CCDC57Q2TAC2 916 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 ZNF333Q96JL9 665 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 CNNM1Q9NRU3 951 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 SERPINA10Q9UK55 444 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 IQSEC3Q9UPP2 1182 aaPredicted RBP13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 PTCH2Q9Y6C5 1203 aa13.06□□□□□ -0.32
CYSTM1-203ENST00000509589 SZT2Q5T011 3432 aa13.05□□□□□ -0.32
CYSTM1-203ENST00000509589 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
CYSTM1-203ENST00000509589 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
CYSTM1-203ENST00000509589 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
CYSTM1-203ENST00000509589 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
CYSTM1-203ENST00000509589 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
CYSTM1-203ENST00000509589 CCL15-CCL14A0A0B4J2E2 113 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 GRM8O00222 908 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 MYCP01106 439 aaPredicted RBP13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 CRKP46108 304 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 CACNB3P54284 484 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 TNFAIP1Q13829 316 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 TAF1CQ15572 869 aaPredicted RBP13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 CCL15Q16663 113 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.04□□□□□ -0.323e-7■■■■■ 45.7
CYSTM1-203ENST00000509589 ARHGAP39Q9C0H5 1083 aa13.04□□□□□ -0.32
CYSTM1-203ENST00000509589 HIBADHP31937 336 aaKnown RBP13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 FXR1P51114 621 aaKnown RBP eCLIP13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 SLC9C1Q4G0N8 1177 aa13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
CYSTM1-203ENST00000509589 GTF2A2P52657 109 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 ZFYVE28Q9HCC9 887 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
CYSTM1-203ENST00000509589 RANBP2P49792 3224 aaKnown RBP13.01□□□□□ -0.33
CYSTM1-203ENST00000509589 SPDYE5A6NIY4 337 aa13.01□□□□□ -0.33
CYSTM1-203ENST00000509589 ZKSCAN4Q969J2 545 aaPredicted RBP13.01□□□□□ -0.33
CYSTM1-203ENST00000509589 RIPOR2Q9Y4F9 1068 aa13.01□□□□□ -0.33
CYSTM1-203ENST00000509589 CSADQ9Y600 493 aa13.01□□□□□ -0.33
CYSTM1-203ENST00000509589 BTBD19C9JJ37 291 aa13□□□□□ -0.33
CYSTM1-203ENST00000509589 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
CYSTM1-203ENST00000509589 SLC4A8Q2Y0W8 1093 aa13□□□□□ -0.33
CYSTM1-203ENST00000509589 FBXO33Q7Z6M2 555 aa13□□□□□ -0.33
CYSTM1-203ENST00000509589 WRNIP1Q96S55 665 aa13□□□□□ -0.33
CYSTM1-203ENST00000509589 IRF6O14896 467 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 TLR2O60603 784 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 FRAT2O75474 233 aaPredicted RBP12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 CTGFP29279 349 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 TNNI2P48788 182 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 LRRC24Q50LG9 513 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 CEP290O15078 2479 aa12.99□□□□□ -0.33
CYSTM1-203ENST00000509589 MGAMO43451 1857 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 H0YGN5 161 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 CETPP11597 493 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 ERO1BQ86YB8 467 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 WDR63Q8IWG1 891 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 VGLL2Q8N8G2 317 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 KLHDC4Q8TBB5 520 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 TEKT1Q969V4 418 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 BICC1Q9H694 974 aaKnown RBP12.98□□□□□ -0.33
CYSTM1-203ENST00000509589 MROH5Q6ZUA9 1318 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 TRIOBPQ9H2D6 2365 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 BCAMP50895 628 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 SNAPC2Q13487 334 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 ANKRD44Q8N8A2 993 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 ZDHHC15Q96MV8 337 aa12.97□□□□□ -0.33
CYSTM1-203ENST00000509589 UTYO14607 1347 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 INPP5BP32019 993 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 HDLBPQ00341 1268 aaKnown RBP12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 PPIL2Q13356 520 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 ARHGEF6Q15052 776 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 MTFR1Q15390 333 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 MIGA2Q7L4E1 593 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 CPA4Q9UI42 421 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 DOCK2Q92608 1830 aa12.96□□□□□ -0.33
CYSTM1-203ENST00000509589 MYH2Q9UKX2 1941 aa12.96□□□□□ -0.34
CYSTM1-203ENST00000509589 PDE8BO95263 885 aa12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 RABL6Q3YEC7 729 aaPredicted RBP12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
CYSTM1-203ENST00000509589 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms