RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 FGFR2P21802 821 aa13.68□□□□□ -0.22
RNF4-212ENST00000509258 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
RNF4-212ENST00000509258 TNFAIP1Q13829 316 aa13.68□□□□□ -0.22
RNF4-212ENST00000509258 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
RNF4-212ENST00000509258 PRPF38BQ5VTL8 546 aaKnown RBP13.68□□□□□ -0.22
RNF4-212ENST00000509258 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
RNF4-212ENST00000509258 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
RNF4-212ENST00000509258 LRRFIP2Q9Y608 721 aaKnown RBP13.68□□□□□ -0.22
RNF4-212ENST00000509258 PDE8BO95263 885 aa13.67□□□□□ -0.22
RNF4-212ENST00000509258 IREB2P48200 963 aaKnown RBP13.67□□□□□ -0.22
RNF4-212ENST00000509258 BCAMP50895 628 aa13.67□□□□□ -0.22
RNF4-212ENST00000509258 RBM5P52756 815 aaKnown RBP eCLIP13.67□□□□□ -0.22
RNF4-212ENST00000509258 MFSD14BQ5SR56 506 aa13.67□□□□□ -0.22
RNF4-212ENST00000509258 WNK4Q96J92 1243 aa13.67□□□□□ -0.22
RNF4-212ENST00000509258 CLMNQ96JQ2 1002 aa13.67□□□□□ -0.22
RNF4-212ENST00000509258 PA2G4Q9UQ80 394 aaKnown RBP13.67□□□□□ -0.22
RNF4-212ENST00000509258 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
RNF4-212ENST00000509258 EYA2O00167 538 aa13.66□□□□□ -0.22
RNF4-212ENST00000509258 RASA3Q14644 834 aa13.66□□□□□ -0.22
RNF4-212ENST00000509258 SIL1Q9H173 461 aa13.66□□□□□ -0.22
RNF4-212ENST00000509258 R3HDMLQ9H3Y0 253 aa13.66□□□□□ -0.22
RNF4-212ENST00000509258 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
RNF4-212ENST00000509258 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.66□□□□□ -0.22
RNF4-212ENST00000509258 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 IGF2BP3O00425 579 aaKnown RBP eCLIP13.65□□□□□ -0.22
RNF4-212ENST00000509258 UBTFL1P0CB47 393 aaPredicted RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 CHAF1AQ13111 956 aaPredicted RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
RNF4-212ENST00000509258 NBPF12Q5TAG4 269 aaPredicted RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 DIEXFQ68CQ4 756 aaKnown RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 OTUD7BQ6GQQ9 843 aa13.65□□□□□ -0.22
RNF4-212ENST00000509258 ANKRD13AQ8IZ07 590 aa13.65□□□□□ -0.22
RNF4-212ENST00000509258 API5Q9BZZ5 524 aaKnown RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
RNF4-212ENST00000509258 TRIM27P14373 513 aa13.64□□□□□ -0.23
RNF4-212ENST00000509258 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
RNF4-212ENST00000509258 TDRD3Q9H7E2 651 aaKnown RBP13.64□□□□□ -0.23
RNF4-212ENST00000509258 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
RNF4-212ENST00000509258 HTTP42858 3142 aa13.64□□□□□ -0.23
RNF4-212ENST00000509258 AK9Q5TCS8 1911 aa13.64□□□□□ -0.23
RNF4-212ENST00000509258 USP2O75604 605 aaPredicted RBP13.63□□□□□ -0.23
RNF4-212ENST00000509258 HNRNPUQ00839 825 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF4-212ENST00000509258 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
RNF4-212ENST00000509258 OTOP1Q7RTM1 612 aa13.63□□□□□ -0.23
RNF4-212ENST00000509258 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
RNF4-212ENST00000509258 ERO1AQ96HE7 468 aa13.63□□□□□ -0.23
RNF4-212ENST00000509258 ZNF70Q9UC06 446 aaPredicted RBP13.63□□□□□ -0.23
RNF4-212ENST00000509258 ADORA1P30542 326 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 GJA5P36382 358 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 CRKP46108 304 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 TNNI2P48788 182 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 CACNB3P54284 484 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 CRHR2Q13324 411 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 DZIP1LQ8IYY4 767 aaKnown RBP13.62□□□□□ -0.23
RNF4-212ENST00000509258 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
RNF4-212ENST00000509258 TESPA1A2RU30 521 aaPredicted RBP13.61□□□□□ -0.23
RNF4-212ENST00000509258 FRAT2O75474 233 aaPredicted RBP13.61□□□□□ -0.23
RNF4-212ENST00000509258 CAVIN4Q5BKX8 364 aa13.61□□□□□ -0.23
RNF4-212ENST00000509258 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
RNF4-212ENST00000509258 ARHGAP45Q92619 1136 aa13.61□□□□□ -0.23
RNF4-212ENST00000509258 CLUAP1Q96AJ1 413 aa13.61□□□□□ -0.23
RNF4-212ENST00000509258 OPTNQ96CV9 577 aa13.61□□□□□ -0.23
RNF4-212ENST00000509258 ELP3Q9H9T3 547 aa13.61□□□□□ -0.23
RNF4-212ENST00000509258 CIAO1O76071 339 aa13.6□□□□□ -0.23
RNF4-212ENST00000509258 PHKA1P46020 1223 aa13.6□□□□□ -0.23
RNF4-212ENST00000509258 ATP2B3Q16720 1220 aa13.6□□□□□ -0.23
RNF4-212ENST00000509258 ATF7IPQ6VMQ6 1270 aa13.6□□□□□ -0.23
RNF4-212ENST00000509258 FRAT1Q92837 279 aaPredicted RBP13.6□□□□□ -0.23
RNF4-212ENST00000509258 COPRSQ9NQ92 184 aa13.6□□□□□ -0.23
RNF4-212ENST00000509258 TCP10L2B9ZVM9 353 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 IFIT1P09914 478 aaKnown RBP13.59□□□□□ -0.23
RNF4-212ENST00000509258 RLBP1P12271 317 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 SLC5A1P13866 664 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 HDLBPQ00341 1268 aaKnown RBP13.59□□□□□ -0.23
RNF4-212ENST00000509258 SP3Q02447 781 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 VGLL4Q14135 290 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 TMEM57Q8N5G2 664 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 CD99L2Q8TCZ2 262 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 LPIN2Q92539 896 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 TEKT1Q969V4 418 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 PTPN18Q99952 460 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 TMEM39BQ9GZU3 492 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 CSADQ9Y600 493 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 DOCK2Q92608 1830 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 CDK5RAP2Q96SN8 1893 aa13.59□□□□□ -0.23
RNF4-212ENST00000509258 PNMA6EA0A0J9YXQ4 647 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 GTF2A2P52657 109 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 DIXDC1Q155Q3 683 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 APOBEC3HQ6NTF7 200 aaKnown RBP13.58□□□□□ -0.24
RNF4-212ENST00000509258 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.58□□□□□ -0.24
RNF4-212ENST00000509258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.58□□□□□ -0.24
RNF4-212ENST00000509258 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 TMOD2Q9NZR1 351 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 PTPN22Q9Y2R2 807 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 MAST3O60307 1309 aa13.58□□□□□ -0.24
RNF4-212ENST00000509258 ZSWIM8A7E2V4 1837 aa13.57□□□□□ -0.24
RNF4-212ENST00000509258 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms