RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 CACTIN-AS1Q8N1I8 211 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 Q8N3U1 123 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 BSNDQ8WZ55 320 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 BTBD6Q96KE9 485 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 SPOCK3Q9BQ16 436 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 ZFYVE1Q9HBF4 777 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 FHAD1B1AJZ9 1412 aa7.07□□□□□ -1.28
TRAPPC13-210ENST00000509234 ALAS2P22557 587 aa7.06□□□□□ -1.28
TRAPPC13-210ENST00000509234 ZNF76P36508 570 aa7.06□□□□□ -1.28
TRAPPC13-210ENST00000509234 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-210ENST00000509234 CHSY3Q70JA7 882 aa7.06□□□□□ -1.28
TRAPPC13-210ENST00000509234 RNF34Q969K3 372 aa7.06□□□□□ -1.28
TRAPPC13-210ENST00000509234 PPP4R2Q9NY27 417 aa7.06□□□□□ -1.28
TRAPPC13-210ENST00000509234 SHROOM2Q13796 1616 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 CEP170Q5SW79 1584 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 B3GALT4O96024 378 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 NID1P14543 1247 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 PTPRAP18433 802 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 DGKGP49619 791 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 DTHD1Q6ZMT9 781 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 GALNT6Q8NCL4 622 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 NECAB3Q96P71 396 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 CLEC4MQ9H2X3 399 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 SEC31BQ9NQW1 1179 aa7.05□□□□□ -1.28
TRAPPC13-210ENST00000509234 ENC1O14682 589 aa7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 RGS9O75916 674 aaPredicted RBP7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 EPHA1P21709 976 aa7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 ZNF423Q2M1K9 1284 aa7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 SV2BQ7L1I2 683 aa7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 RSRP1Q9BUV0 290 aa7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 SRA1Q9HD15 236 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-210ENST00000509234 ERCC6L2Q5T890 1561 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 M0R082 166 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 ESRRAP11474 423 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 C8orf86Q6ZUL3 223 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 NT5DC4Q86YG4 428 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 ZNF417Q8TAU3 575 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 NUDT8Q8WV74 236 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 C8orf37Q96NL8 207 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 ZNF587Q96SQ5 575 aaPredicted RBP7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 NRSN2Q9GZP1 204 aa7.03□□□□□ -1.28
TRAPPC13-210ENST00000509234 K7ELQ4 463 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 CDC27P30260 824 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 RACK1P63244 317 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 PCDH1Q08174 1060 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 ASAP3Q8TDY4 903 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 DCAF5Q96JK2 942 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 TGIF2Q9GZN2 237 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 SOX17Q9H6I2 414 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 JPH1Q9HDC5 661 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 KCNQ5Q9NR82 932 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 SH2B1Q9NRF2 756 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 DDX41Q9UJV9 622 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 TTF2Q9UNY4 1162 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 AKAP2Q9Y2D5 859 aa7.02□□□□□ -1.29
TRAPPC13-210ENST00000509234 H3BRJ5 948 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 LILRB5O75023 590 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 CELA3AP09093 270 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 C9orf131Q5VYM1 1079 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 HS2ST1Q7LGA3 356 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 WNT8BQ93098 351 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 RHOVQ96L33 236 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 TRIM56Q9BRZ2 755 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 CEP44Q9C0F1 390 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
TRAPPC13-210ENST00000509234 SOX1O00570 391 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-210ENST00000509234 FBXO24O75426 580 aa7□□□□□ -1.29
TRAPPC13-210ENST00000509234 PAGE1O75459 146 aa7□□□□□ -1.29
TRAPPC13-210ENST00000509234 MSL1Q68DK7 614 aa7□□□□□ -1.29
TRAPPC13-210ENST00000509234 TPTE2Q6XPS3 522 aa7□□□□□ -1.29
TRAPPC13-210ENST00000509234 COPRSQ9NQ92 184 aa7□□□□□ -1.29
TRAPPC13-210ENST00000509234 CACNA2D2Q9NY47 1150 aa7□□□□□ -1.29
TRAPPC13-210ENST00000509234 ITGB2P05107 769 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 BMP6P22004 513 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 GARTP22102 1010 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 ERCC5P28715 1186 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 CCDC85BQ15834 202 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 ZNF394Q53GI3 561 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 HGSNATQ68CP4 663 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 GDF6Q6KF10 455 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 LINC00114Q6XXX2 140 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 TINF2Q9BSI4 451 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 ENAMQ9NRM1 1142 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 TMEM39AQ9NV64 488 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 CNTNAP5Q8WYK1 1306 aa6.99□□□□□ -1.29
TRAPPC13-210ENST00000509234 RLBP1P12271 317 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 LIG3P49916 1009 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 RPS26P62854 115 aaKnown RBP6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 PIP4K2BP78356 416 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 RASIP1Q5U651 963 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 AGMOQ6ZNB7 445 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 PDZD3Q86UT5 571 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 PHC3Q8NDX5 983 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 STK35Q8TDR2 534 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 OSGEPQ9NPF4 335 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 KBTBD4Q9NVX7 518 aa6.98□□□□□ -1.29
TRAPPC13-210ENST00000509234 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms