RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 UBASH3AP57075 661 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 NLRP12P59046 1061 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 PTH1RQ03431 593 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 PPFIA1Q13136 1202 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 TOGARAM2Q6ZUX3 1019 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 RHOXF2Q9BQY4 288 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 ALDH8A1Q9H2A2 487 aaPredicted RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 HPCAL4Q9UM19 191 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 N4BP2Q86UW6 1770 aaPredicted RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 MAP2P11137 1827 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 PNMA6EA0A0J9YXQ4 647 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 EIF3HO15372 352 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 PSMA5P28066 241 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 FMR1NBQ8N0W7 255 aaPredicted RBP11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 OTUD6BQ8N6M0 293 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 BRF1Q92994 677 aa11.45□□□□□ -0.58
PDGFRA-207ENST00000509092 H3BQV1 296 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 HMOX1P09601 288 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 ARHGAP25P42331 645 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 CEBPAP49715 358 aaPredicted RBP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 CEBPZQ03701 1054 aaKnown RBP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 GOLGA8FQ08AF8 430 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 GOLGA8DPQ0D2H9 430 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 NECTIN1Q15223 517 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 ZC3H12AQ5D1E8 599 aaKnown RBP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 ATL3Q6DD88 541 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 SDF4Q9BRK5 362 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 KLC4Q9NSK0 619 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 ZC3H4Q9UPT8 1303 aaKnown RBP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 SMTNP53814 917 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 RWDD2BP57060 319 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 IDI1Q13907 227 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 KARSQ15046 597 aaKnown RBP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 PLCB4Q15147 1175 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 FMNL2Q96PY5 1086 aa11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 C14orf93Q9H972 538 aaKnown RBP11.44□□□□□ -0.58
PDGFRA-207ENST00000509092 GRIN2DO15399 1336 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 ADGRB3O60242 1522 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 MEFVO15553 781 aaPredicted RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CCDC26Q8TAB7 109 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 MRPS27Q92552 414 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 DPF2Q92785 391 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CAPS2Q9BXY5 557 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 HSD3B7Q9H2F3 369 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CTAGE15A4D2H0 777 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 MYO1BO43795 1136 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 ECM2O94769 699 aaPredicted RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 IPO7O95373 1038 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 SERPINC1P01008 464 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CTAGE8P0CG41 777 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 MCM3P25205 808 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 PIP4K2BP78356 416 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 TBX2Q13207 712 aaPredicted RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 SF3B2Q13435 895 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 WHAMMP3Q1A5X7 153 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CFAP100Q494V2 611 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 SLC4A10Q6U841 1118 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 YTHDF3Q7Z739 585 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CTAGE6Q86UF2 777 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CTAGE4Q8IX94 777 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 MAGEC3Q8TD91 643 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 DDX54Q8TDD1 881 aaKnown RBP11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
PDGFRA-207ENST00000509092 NPHP4O75161 1426 aaPredicted RBP11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 MYO5BQ9ULV0 1848 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 GOLGA6CA6NDK9 693 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 RASSF9O75901 435 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 GOLGA6DP0CG33 693 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 AMPHP49418 695 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 ATP2B2Q01814 1243 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 TRAF1Q13077 416 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 STIM1Q13586 685 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 CREB3L3Q68CJ9 461 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 TLDC1Q6P9B6 456 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 ZNF396Q96N95 335 aaPredicted RBP11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 NUCKS1Q9H1E3 243 aaKnown RBP11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 IL1RAPL2Q9NP60 686 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 GOLGA6AQ9NYA3 693 aa11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
PDGFRA-207ENST00000509092 KIF5CO60282 957 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 PFKFB2O60825 505 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 MYBL2P10244 700 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 SLC8A3P57103 927 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 TOB2Q14106 344 aaPredicted RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 BLOC1S2Q6QNY1 142 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 CCDC50Q8IVM0 306 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 VCPKMTQ9H867 229 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 MRPL44Q9H9J2 332 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 ATP6V0A4Q9HBG4 840 aa11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 CCDC9Q9Y3X0 531 aaKnown RBP11.41□□□□□ -0.58
PDGFRA-207ENST00000509092 EME2A4GXA9 379 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms