RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 EPS15P42566 896 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 SLC10A5Q5PT55 438 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 KIF6Q6ZMV9 814 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 USP50Q70EL3 339 aaPredicted RBP11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 LRP10Q7Z4F1 713 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 LARGE2Q8N3Y3 721 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 EHBP1Q8NDI1 1231 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 RPGRQ92834 1020 aaKnown RBP11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 ERBB4Q15303 1308 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 FAM187AA6NFU0 413 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 DGAT1O75907 488 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 NEFMP07197 916 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 MYL6BP14649 208 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 GPTP24298 496 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 NFE2L2Q16236 605 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 CST9Q5W186 159 aa11.35□□□□□ -0.59
COL4A3BP-206ENST00000508809 FMR1Q06787 632 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 PARP10Q53GL7 1025 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 PPP1R42Q7Z4L9 355 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 ZNF511Q8NB15 262 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 BAP1Q92560 729 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 NLRP3Q96P20 1036 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 RTFDC1Q9BY42 306 aaPredicted RBP11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 ABT1Q9ULW3 272 aaKnown RBP11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
COL4A3BP-206ENST00000508809 SKOR1P84550 965 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 CTDSPL2Q05D32 466 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 NIM1KQ8IY84 436 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 PNMA1Q8ND90 353 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 SNIP1Q8TAD8 396 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 THUMPD2Q9BTF0 503 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 PNNQ9H307 717 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 ADARB2Q9NS39 739 aaKnown RBP11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 PGAP2Q9UHJ9 254 aa11.33□□□□□ -0.6
COL4A3BP-206ENST00000508809 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 BBOX1O75936 387 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 RFC5P40937 340 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 ECE1P42892 770 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 SH3BP2P78314 561 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 CXCL9Q07325 125 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 ABHD8Q96I13 439 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 UTP14AQ9BVJ6 771 aaKnown RBP11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 BABAM1Q9NWV8 329 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 GPRC5DQ9NZD1 345 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
COL4A3BP-206ENST00000508809 TRAF5O00463 557 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 MAP2K2P36507 400 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 AGERQ15109 404 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 AOC3Q16853 763 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 TRAF7Q6Q0C0 670 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 SUPT20HQ8NEM7 779 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 TMX4Q9H1E5 349 aaPredicted RBP11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 ABCC4O15439 1325 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 ANKRD36CQ5JPF3 1778 aa11.31□□□□□ -0.6
COL4A3BP-206ENST00000508809 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
COL4A3BP-206ENST00000508809 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
COL4A3BP-206ENST00000508809 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
COL4A3BP-206ENST00000508809 TOR4AQ9NXH8 423 aa11.3□□□□□ -0.6
COL4A3BP-206ENST00000508809 TSPYL4Q9UJ04 414 aa11.3□□□□□ -0.6
COL4A3BP-206ENST00000508809 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
COL4A3BP-206ENST00000508809 LAMB2P55268 1798 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 EIF2S2P20042 333 aaKnown RBP11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 RGS19P49795 217 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 PROSER3Q2NL68 480 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 HSP90AB3PQ58FF7 597 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 NLRP10Q86W26 655 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 CDHR2Q9BYE9 1310 aa11.29□□□□□ -0.6
COL4A3BP-206ENST00000508809 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 TAF1P21675 1872 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 GMPSP49915 693 aaPredicted RBP11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 DPP8Q6V1X1 898 aaPredicted RBP11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 COPS6Q7L5N1 327 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 BPHLQ86WA6 291 aaPredicted RBP11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 MPNDQ8N594 471 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 MAPK8IP3Q9UPT6 1336 aa11.28□□□□□ -0.6
COL4A3BP-206ENST00000508809 CA12O43570 354 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 AOC2O75106 756 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 ANXA1P04083 346 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 HCLS1P14317 486 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms