RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 WDR66Q8TBY9 1149 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 PRMT6Q96LA8 375 aaPredicted RBP15.22■□□□□ 0.03
PTPN20-218ENST00000508357 GNL3LQ9NVN8 582 aaKnown RBP15.22■□□□□ 0.03
PTPN20-218ENST00000508357 DENND2AQ9ULE3 1009 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 SSC5DA1L4H1 1573 aa15.22■□□□□ 0.03
PTPN20-218ENST00000508357 CRKP46108 304 aa15.21■□□□□ 0.03
PTPN20-218ENST00000508357 MMP14P50281 582 aa15.21■□□□□ 0.03
PTPN20-218ENST00000508357 CDC37L1Q7L3B6 337 aa15.21■□□□□ 0.03
PTPN20-218ENST00000508357 ZNF384Q8TF68 577 aa15.21■□□□□ 0.03
PTPN20-218ENST00000508357 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
PTPN20-218ENST00000508357 SERPINA10Q9UK55 444 aa15.21■□□□□ 0.03
PTPN20-218ENST00000508357 CLRN2A0PK11 232 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 DLGAP5Q15398 846 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 DIXDC1Q155Q3 683 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 HSP90AB4PQ58FF6 505 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 AACSQ86V21 672 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 DNAJC5GQ8N7S2 189 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 EXOC6Q8TAG9 804 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 DCPSQ96C86 337 aaKnown RBP15.2■□□□□ 0.02
PTPN20-218ENST00000508357 KIF1BPQ96EK5 621 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 SUGT1Q9Y2Z0 365 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 MYO5AQ9Y4I1 1855 aaKnown RBP15.2■□□□□ 0.02
PTPN20-218ENST00000508357 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
PTPN20-218ENST00000508357 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
PTPN20-218ENST00000508357 TMEM88BA6NKF7 163 aa15.19■□□□□ 0.02
PTPN20-218ENST00000508357 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
PTPN20-218ENST00000508357 SPATA5Q8NB90 893 aa15.19■□□□□ 0.02
PTPN20-218ENST00000508357 CDCA5Q96FF9 252 aa15.19■□□□□ 0.02
PTPN20-218ENST00000508357 DCTPP1Q9H773 170 aa15.19■□□□□ 0.02
PTPN20-218ENST00000508357 SMARCA5O60264 1052 aaPredicted RBP15.18■□□□□ 0.02
PTPN20-218ENST00000508357 CELF2O95319 508 aaKnown RBP15.18■□□□□ 0.02
PTPN20-218ENST00000508357 HDLBPQ00341 1268 aaKnown RBP15.18■□□□□ 0.02
PTPN20-218ENST00000508357 SPDYE2Q495Y8 402 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 GORABQ5T7V8 394 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 PRAMEF18Q5VWM3 479 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
PTPN20-218ENST00000508357 TBC1D9Q6ZT07 1266 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 SULF1Q8IWU6 871 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 ZNF512BQ96KM6 892 aaPredicted RBP15.18■□□□□ 0.02
PTPN20-218ENST00000508357 ZDHHC15Q96MV8 337 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 SNRKQ9NRH2 765 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 DAGLAQ9Y4D2 1042 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 RFX7Q2KHR2 1363 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 PAPPA2Q9BXP8 1791 aa15.18■□□□□ 0.02
PTPN20-218ENST00000508357 MAST3O60307 1309 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 CNTNAP1P78357 1384 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
PTPN20-218ENST00000508357 UQCRFS1P1P0C7P4 283 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 RBM5P52756 815 aaKnown RBP eCLIP15.17■□□□□ 0.02
PTPN20-218ENST00000508357 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 TEKT1Q969V4 418 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
PTPN20-218ENST00000508357 ZNF408Q9H9D4 720 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 ZNF70Q9UC06 446 aaPredicted RBP15.17■□□□□ 0.02
PTPN20-218ENST00000508357 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 GAKO14976 1311 aa15.17■□□□□ 0.02
PTPN20-218ENST00000508357 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
PTPN20-218ENST00000508357 ZAP70P43403 619 aa15.16■□□□□ 0.02
PTPN20-218ENST00000508357 IRX6P78412 446 aaPredicted RBP15.16■□□□□ 0.02
PTPN20-218ENST00000508357 APOBEC3FQ8IUX4 373 aaKnown RBP15.16■□□□□ 0.02
PTPN20-218ENST00000508357 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
PTPN20-218ENST00000508357 ABCF2Q9UG63 623 aa15.16■□□□□ 0.02
PTPN20-218ENST00000508357 TLL2Q9Y6L7 1015 aa15.16■□□□□ 0.02
PTPN20-218ENST00000508357 RASSF10A6NK89 507 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 CACNB3P54284 484 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 CCDC158Q5M9N0 1113 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 CLASRPQ8N2M8 674 aaKnown RBP15.15■□□□□ 0.02
PTPN20-218ENST00000508357 KLRG1Q96E93 195 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 MRIQ9BWK5 157 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 LRRCC1Q9C099 1032 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 VEZTQ9HBM0 779 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 MKRN1Q9UHC7 482 aaKnown RBP15.15■□□□□ 0.02
PTPN20-218ENST00000508357 OTOFQ9HC10 1997 aa15.15■□□□□ 0.02
PTPN20-218ENST00000508357 MECOMQ03112 1051 aa15.14■□□□□ 0.01
PTPN20-218ENST00000508357 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
PTPN20-218ENST00000508357 SAPCD2Q86UD0 394 aa15.14■□□□□ 0.01
PTPN20-218ENST00000508357 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
PTPN20-218ENST00000508357 NSUN4Q96CB9 384 aaKnown RBP15.14■□□□□ 0.01
PTPN20-218ENST00000508357 MOB2Q70IA6 237 aa15.13■□□□□ 0.01
PTPN20-218ENST00000508357 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
PTPN20-218ENST00000508357 BCL11AQ9H165 835 aa15.13■□□□□ 0.01
PTPN20-218ENST00000508357 DEFB129Q9H1M3 183 aa15.13■□□□□ 0.01
PTPN20-218ENST00000508357 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
PTPN20-218ENST00000508357 GBA2Q9HCG7 927 aaPredicted RBP15.13■□□□□ 0.01
PTPN20-218ENST00000508357 ABT1Q9ULW3 272 aaKnown RBP15.13■□□□□ 0.01
PTPN20-218ENST00000508357 MROH7-TTC4A0A0A0MT08 1334 aa15.13■□□□□ 0.01
PTPN20-218ENST00000508357 PCNTO95613 3336 aa15.12■□□□□ 0.01
PTPN20-218ENST00000508357 TCP10L2B9ZVM9 353 aa15.12■□□□□ 0.01
PTPN20-218ENST00000508357 MYO1BO43795 1136 aa15.12■□□□□ 0.01
PTPN20-218ENST00000508357 IFIT2P09913 472 aaKnown RBP15.12■□□□□ 0.01
PTPN20-218ENST00000508357 RASA3Q14644 834 aa15.12■□□□□ 0.01
PTPN20-218ENST00000508357 CDC42EP5Q6NZY7 148 aa15.12■□□□□ 0.01
PTPN20-218ENST00000508357 OTUD7AQ8TE49 926 aaPredicted RBP15.12■□□□□ 0.01
PTPN20-218ENST00000508357 TEPSINQ96N21 525 aa15.12■□□□□ 0.01
PTPN20-218ENST00000508357 FZD1Q9UP38 647 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms