RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 LSG1Q9H089 658 aaKnown RBP13.17□□□□□ -0.3
PROM1-207ENST00000508167 PIH1D3Q9NQM4 214 aaKnown RBP13.17□□□□□ -0.3
PROM1-207ENST00000508167 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 MCM4P33991 863 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 GSE1Q14687 1217 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 MIGA1Q8NAN2 632 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 KCNB2Q92953 911 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 C15orf52Q6ZUT6 534 aaKnown RBP13.17□□□□□ -0.3
PROM1-207ENST00000508167 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.17□□□□□ -0.3
PROM1-207ENST00000508167 ANO2Q9NQ90 1003 aa13.17□□□□□ -0.3
PROM1-207ENST00000508167 GSTO1P78417 241 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 RABEP1Q15276 862 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 PKP1Q13835 747 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 TNPO1Q92973 898 aaKnown RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 PSMD14O00487 310 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 RNF113AO15541 343 aaKnown RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 IL1R1P14778 569 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
PROM1-207ENST00000508167 ZNF512BQ96KM6 892 aaPredicted RBP13.16□□□□□ -0.3
PROM1-207ENST00000508167 MYH7P12883 1935 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 CXCL9Q07325 125 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 VPS33BQ9H267 617 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 SGSM2O43147 1006 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 LMOD1P29536 600 aaPredicted RBP13.15□□□□□ -0.3
PROM1-207ENST00000508167 ZNF532Q9HCE3 1301 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 EPB41L2O43491 1005 aaKnown RBP13.15□□□□□ -0.3
PROM1-207ENST00000508167 HSPA4P34932 840 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 DIXDC1Q155Q3 683 aa13.15□□□□□ -0.3
PROM1-207ENST00000508167 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
PROM1-207ENST00000508167 BAG3O95817 575 aa13.14□□□□□ -0.31
PROM1-207ENST00000508167 PDE6AP16499 860 aa13.14□□□□□ -0.31
PROM1-207ENST00000508167 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
PROM1-207ENST00000508167 DOCK2Q92608 1830 aa13.14□□□□□ -0.31
PROM1-207ENST00000508167 RAD50Q92878 1312 aa13.14□□□□□ -0.31
PROM1-207ENST00000508167 SLFNL1Q499Z3 407 aa13.14□□□□□ -0.31
PROM1-207ENST00000508167 TTC14Q96N46 770 aa13.14□□□□□ -0.31
PROM1-207ENST00000508167 MAST3O60307 1309 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 FSD2A1L4K1 749 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
PROM1-207ENST00000508167 MECOMQ03112 1051 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 CUL4AQ13619 759 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
PROM1-207ENST00000508167 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 TMOD2Q9NZR1 351 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 H7C1D1 291 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 TEKT1Q969V4 418 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 AATFQ9NY61 560 aaKnown RBP eCLIP13.13□□□□□ -0.31
PROM1-207ENST00000508167 REC8O95072 547 aa13.13□□□□□ -0.31
PROM1-207ENST00000508167 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 YDJCA8MPS7 323 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 USP5P45974 858 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 RSBN1LQ6PCB5 846 aaPredicted RBP13.12□□□□□ -0.31
PROM1-207ENST00000508167 MYO1BO43795 1136 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 APPBP2Q92624 585 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 SEC62Q99442 399 aaKnown RBP13.12□□□□□ -0.31
PROM1-207ENST00000508167 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
PROM1-207ENST00000508167 MBD4O95243 580 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 CHGBP05060 677 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 ANAPC15P60006 121 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 CCDC129Q6ZRS4 1044 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
PROM1-207ENST00000508167 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
PROM1-207ENST00000508167 VEZTQ9HBM0 779 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 DDNO94850 711 aaPredicted RBP13.11□□□□□ -0.31
PROM1-207ENST00000508167 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 ARMT1Q9H993 441 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 FAM205AQ6ZU69 1335 aa13.11□□□□□ -0.31
PROM1-207ENST00000508167 MCCP23508 829 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 ADD2P35612 726 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 GMPSP49915 693 aaPredicted RBP13.1□□□□□ -0.31
PROM1-207ENST00000508167 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 TOMM22Q9NS69 142 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 RPAP1Q9BWH6 1393 aaPredicted RBP13.1□□□□□ -0.31
PROM1-207ENST00000508167 TDO2P48775 406 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 ST3GAL1Q11201 340 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 PICALMQ13492 652 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 STK11IPQ8N1F8 1099 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 TCHHQ07283 1943 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 SLC4A4Q9Y6R1 1079 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 BTDP43251 543 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 PTH1RQ03431 593 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 UBE3CQ15386 1083 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 GRIK5Q16478 980 aa13.1□□□□□ -0.31
PROM1-207ENST00000508167 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms