RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
PTPN13-206ENST00000507902 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
PTPN13-206ENST00000507902 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
PTPN13-206ENST00000507902 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 IGSF3O75054 1194 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 HHIPL2Q6UWX4 724 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 SPATA5Q8NB90 893 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 ZNF512BQ96KM6 892 aaPredicted RBP16.99■□□□□ 0.31
PTPN13-206ENST00000507902 ZDHHC15Q96MV8 337 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
PTPN13-206ENST00000507902 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
PTPN13-206ENST00000507902 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
PTPN13-206ENST00000507902 FKBP1BP68106 108 aa16.98■□□□□ 0.31
PTPN13-206ENST00000507902 AACSQ86V21 672 aa16.98■□□□□ 0.31
PTPN13-206ENST00000507902 DZIP1Q86YF9 867 aaKnown RBP16.98■□□□□ 0.31
PTPN13-206ENST00000507902 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
PTPN13-206ENST00000507902 CDCA5Q96FF9 252 aa16.98■□□□□ 0.31
PTPN13-206ENST00000507902 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.98■□□□□ 0.31
PTPN13-206ENST00000507902 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
PTPN13-206ENST00000507902 RASSF10A6NK89 507 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 TNNI2P48788 182 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 HTRA3P83110 453 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 CST9Q5W186 159 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 HHIPL1Q96JK4 782 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
PTPN13-206ENST00000507902 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 ABCF2Q9UG63 623 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 DBNLQ9UJU6 430 aaKnown RBP16.97■□□□□ 0.31
PTPN13-206ENST00000507902 TLL2Q9Y6L7 1015 aa16.97■□□□□ 0.31
PTPN13-206ENST00000507902 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
PTPN13-206ENST00000507902 PRDX5P30044 214 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 ECE1P42892 770 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 ERICH6Q7L0X2 663 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 EAF2Q96CJ1 260 aaPredicted RBP16.96■□□□□ 0.31
PTPN13-206ENST00000507902 CRBNQ96SW2 442 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
PTPN13-206ENST00000507902 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 PAPPA2Q9BXP8 1791 aa16.96■□□□□ 0.31
PTPN13-206ENST00000507902 CLRN2A0PK11 232 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 APBB1O00213 710 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 MCAMP43121 646 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 GSTO1P78417 241 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 DEFB115Q30KQ5 88 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 SAPCD2Q86UD0 394 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 DNAJC5GQ8N7S2 189 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 CCDC8Q9H0W5 538 aaPredicted RBP16.95■□□□□ 0.3
PTPN13-206ENST00000507902 DEFB129Q9H1M3 183 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
PTPN13-206ENST00000507902 MAST2Q6P0Q8 1798 aa16.94■□□□□ 0.3
PTPN13-206ENST00000507902 FMR1Q06787 632 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPN13-206ENST00000507902 GRIK5Q16478 980 aa16.94■□□□□ 0.3
PTPN13-206ENST00000507902 SUPT20HL1Q3ZLR7 823 aa16.94■□□□□ 0.3
PTPN13-206ENST00000507902 FKBP1CQ5VVH2 108 aa16.94■□□□□ 0.3
PTPN13-206ENST00000507902 LRP2BPQ9P2M1 347 aa16.94■□□□□ 0.3
PTPN13-206ENST00000507902 ZNF70Q9UC06 446 aaPredicted RBP16.94■□□□□ 0.3
PTPN13-206ENST00000507902 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
PTPN13-206ENST00000507902 LDHCP07864 332 aa16.93■□□□□ 0.3
PTPN13-206ENST00000507902 TMED8Q6PL24 325 aaPredicted RBP16.93■□□□□ 0.3
PTPN13-206ENST00000507902 PAXIP1Q6ZW49 1069 aaPredicted RBP16.93■□□□□ 0.3
PTPN13-206ENST00000507902 DCTPP1Q9H773 170 aa16.93■□□□□ 0.3
PTPN13-206ENST00000507902 TDRD3Q9H7E2 651 aaKnown RBP16.93■□□□□ 0.3
PTPN13-206ENST00000507902 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
PTPN13-206ENST00000507902 HUNKP57058 714 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 HOOK2Q96ED9 719 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 RAI14Q9P0K7 980 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
PTPN13-206ENST00000507902 DAGLAQ9Y4D2 1042 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 SUPT16HQ9Y5B9 1047 aaKnown RBP16.92■□□□□ 0.3
PTPN13-206ENST00000507902 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 GAKO14976 1311 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
PTPN13-206ENST00000507902 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 TTLL12Q14166 644 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 RASA3Q14644 834 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 DIXDC1Q155Q3 683 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 APOBEC3HQ6NTF7 200 aaKnown RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 PI16Q6UXB8 463 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 ARMC9Q7Z3E5 817 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 FAM83AQ86UY5 434 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 JMYQ8N9B5 988 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
PTPN13-206ENST00000507902 AKAP11Q9UKA4 1901 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
PTPN13-206ENST00000507902 RPAP1Q9BWH6 1393 aaPredicted RBP16.9■□□□□ 0.3
PTPN13-206ENST00000507902 MECOMQ03112 1051 aa16.9■□□□□ 0.3
PTPN13-206ENST00000507902 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
PTPN13-206ENST00000507902 TCP10L2B9ZVM9 353 aa16.89■□□□□ 0.29
PTPN13-206ENST00000507902 HDAC1Q13547 482 aaPredicted RBP16.89■□□□□ 0.29
PTPN13-206ENST00000507902 CERS3Q8IU89 383 aa16.89■□□□□ 0.29
PTPN13-206ENST00000507902 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
PTPN13-206ENST00000507902 NSUN4Q96CB9 384 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms