RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PDE4AP27815 886 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 TSHZ3Q63HK5 1081 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 MICALL2Q8IY33 904 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 CERS5Q8N5B7 392 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 TEKT1Q969V4 418 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 NOL10Q9BSC4 688 aaKnown RBP24.33■■□□□ 1.49
USP53-203ENST00000507597 MXD3Q9BW11 206 aa24.33■■□□□ 1.49
USP53-203ENST00000507597 SCNN1DP51172 638 aa24.32■■□□□ 1.48
USP53-203ENST00000507597 RBM5P52756 815 aaKnown RBP eCLIP24.32■■□□□ 1.48
USP53-203ENST00000507597 ZNF280AP59817 542 aaPredicted RBP24.32■■□□□ 1.48
USP53-203ENST00000507597 PNMA8AQ86V59 439 aaPredicted RBP24.32■■□□□ 1.48
USP53-203ENST00000507597 GPBP1L1Q9HC44 474 aaPredicted RBP24.32■■□□□ 1.48
USP53-203ENST00000507597 SCN9AQ15858 1988 aa24.32■■□□□ 1.48
USP53-203ENST00000507597 COL1A1P02452 1464 aaPredicted RBP24.32■■□□□ 1.48
USP53-203ENST00000507597 MYO1BO43795 1136 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 PRDX5P30044 214 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 DLGAP5Q15398 846 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 NAA16Q6N069 864 aaPredicted RBP24.31■■□□□ 1.48
USP53-203ENST00000507597 HHIPL2Q6UWX4 724 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 TBC1D9Q6ZT07 1266 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 USP50Q70EL3 339 aaPredicted RBP24.31■■□□□ 1.48
USP53-203ENST00000507597 CERS3Q8IU89 383 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
USP53-203ENST00000507597 ZFYP08048 801 aaPredicted RBP24.3■■□□□ 1.48
USP53-203ENST00000507597 MYOZ2Q9NPC6 264 aa24.3■■□□□ 1.48
USP53-203ENST00000507597 EPHX2P34913 555 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 RGS3P49796 1198 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 MTMR14Q8NCE2 650 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 RILPL2Q969X0 211 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 FAM163AQ96GL9 167 aaPredicted RBP24.29■■□□□ 1.48
USP53-203ENST00000507597 FSD1Q9BTV5 496 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 RRAGCQ9HB90 399 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 PIH1D3Q9NQM4 214 aaKnown RBP24.29■■□□□ 1.48
USP53-203ENST00000507597 UTRNP46939 3433 aa24.29■■□□□ 1.48
USP53-203ENST00000507597 BAG3O95817 575 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 EPS15P42566 896 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 CRKP46108 304 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 MECOMQ03112 1051 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 TTC22Q5TAA0 569 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 ZNF526Q8TF50 670 aaPredicted RBP24.28■■□□□ 1.48
USP53-203ENST00000507597 NSUN4Q96CB9 384 aaKnown RBP24.28■■□□□ 1.48
USP53-203ENST00000507597 ANTXR1Q9H6X2 564 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 NDUFB9Q9Y6M9 179 aa24.28■■□□□ 1.48
USP53-203ENST00000507597 WDR90Q96KV7 1748 aa24.27■■□□□ 1.48
USP53-203ENST00000507597 HIP1O00291 1037 aa24.27■■□□□ 1.48
USP53-203ENST00000507597 MAP4K4O95819 1239 aaPredicted RBP24.27■■□□□ 1.48
USP53-203ENST00000507597 KIF4BQ2VIQ3 1234 aa24.27■■□□□ 1.48
USP53-203ENST00000507597 CFAP100Q494V2 611 aa24.27■■□□□ 1.48
USP53-203ENST00000507597 SLC9C2Q5TAH2 1124 aa24.27■■□□□ 1.48
USP53-203ENST00000507597 TAF1DQ9H5J8 278 aaPredicted RBP24.27■■□□□ 1.48
USP53-203ENST00000507597 AKAP11Q9UKA4 1901 aa24.26■■□□□ 1.47
USP53-203ENST00000507597 PLCG2P16885 1265 aa24.26■■□□□ 1.47
USP53-203ENST00000507597 RBM26Q5T8P6 1007 aaKnown RBP24.26■■□□□ 1.47
USP53-203ENST00000507597 ZDHHC15Q96MV8 337 aa24.26■■□□□ 1.47
USP53-203ENST00000507597 CYP7A1P22680 504 aa24.25■■□□□ 1.47
USP53-203ENST00000507597 MAGEB6Q8N7X4 407 aa24.25■■□□□ 1.47
USP53-203ENST00000507597 ZC3H15Q8WU90 426 aaKnown RBP24.25■■□□□ 1.47
USP53-203ENST00000507597 TMOD2Q9NZR1 351 aa24.25■■□□□ 1.47
USP53-203ENST00000507597 SCN4AP35499 1836 aa24.25■■□□□ 1.47
USP53-203ENST00000507597 UBE3CQ15386 1083 aa24.24■■□□□ 1.47
USP53-203ENST00000507597 TBC1D10BQ4KMP7 808 aaPredicted RBP24.24■■□□□ 1.47
USP53-203ENST00000507597 EDC3Q96F86 508 aaKnown RBP24.24■■□□□ 1.47
USP53-203ENST00000507597 MROH7-TTC4A0A0A0MT08 1334 aa24.24■■□□□ 1.47
USP53-203ENST00000507597 GRIK5Q16478 980 aa24.23■■□□□ 1.47
USP53-203ENST00000507597 SAMD7Q7Z3H4 446 aa24.23■■□□□ 1.47
USP53-203ENST00000507597 RFX7Q2KHR2 1363 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 GAKO14976 1311 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 SPDYE2BA6NHP3 402 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 RNF113AO15541 343 aaKnown RBP24.22■■□□□ 1.47
USP53-203ENST00000507597 SPDYE6P0CI01 402 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 PDE6AP16499 860 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 ADD2P35612 726 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 EAPPQ56P03 285 aaPredicted RBP24.22■■□□□ 1.47
USP53-203ENST00000507597 BMP2KLQ5H9B9 411 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 CLEC11AQ9Y240 323 aa24.22■■□□□ 1.47
USP53-203ENST00000507597 ZNF532Q9HCE3 1301 aa24.21■■□□□ 1.47
USP53-203ENST00000507597 POTECB2RU33 542 aa24.21■■□□□ 1.47
USP53-203ENST00000507597 WNT10BO00744 389 aa24.21■■□□□ 1.47
USP53-203ENST00000507597 DIXDC1Q155Q3 683 aa24.21■■□□□ 1.47
USP53-203ENST00000507597 NMRK2Q9NPI5 230 aa24.21■■□□□ 1.47
USP53-203ENST00000507597 DAGLAQ9Y4D2 1042 aa24.21■■□□□ 1.47
USP53-203ENST00000507597 GPR75-ASB3A0A0A6YYF3 556 aa24.2■■□□□ 1.46
USP53-203ENST00000507597 TNFAIP1Q13829 316 aa24.2■■□□□ 1.46
USP53-203ENST00000507597 DCPSQ96C86 337 aaKnown RBP24.2■■□□□ 1.46
USP53-203ENST00000507597 SDSP20132 328 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 BTDP43251 543 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 TNNI2P48788 182 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 PPP4CP60510 307 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 CASC1Q6TDU7 716 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 LDHDQ86WU2 507 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 APPBP2Q92624 585 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 DIAPH3Q9NSV4 1193 aa24.19■■□□□ 1.46
USP53-203ENST00000507597 ZNF646O15015 1829 aaPredicted RBP24.19■■□□□ 1.46
USP53-203ENST00000507597 MAGEB6P1A0A0J9YX57 407 aa24.18■■□□□ 1.46
USP53-203ENST00000507597 GSPT1P15170 499 aaKnown RBP24.18■■□□□ 1.46
USP53-203ENST00000507597 MFAP1P55081 439 aaKnown RBP24.18■■□□□ 1.46
USP53-203ENST00000507597 ZNF784Q8NCA9 323 aaPredicted RBP24.18■■□□□ 1.46
USP53-203ENST00000507597 TRPM4Q8TD43 1214 aa24.18■■□□□ 1.46
USP53-203ENST00000507597 RUFY2Q8WXA3 655 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms