RNA–Protein interactions for RNA: ENST00000507232.5

SPDL1-206, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 1 (best)

Gene SPDL1, Length 2,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-206ENST00000507232 CCDC73Q6ZRK6 1079 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 ZNF34Q8IZ26 560 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 ARMT1Q9H993 441 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 NEDD4P46934 1319 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 ANKRD36CQ5JPF3 1778 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 WTIPA6NIX2 430 aaPredicted RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 NUTM2BA6NNL0 878 aaPredicted RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 NUTM2EB1AL46 878 aaPredicted RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 PRKAB2O43741 272 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 IL6STP40189 918 aaPredicted RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 LRMPQ12912 555 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 HSP90AA2PQ14568 343 aaPredicted RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 PUM3Q15397 648 aaKnown RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 INTS5Q6P9B9 1019 aaKnown RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 NUTM2AQ8IVF1 878 aaPredicted RBP15.16■□□□□ 0.02
SPDL1-206ENST00000507232 TSC1Q92574 1164 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 ARID3AQ99856 593 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 FAM13BQ9NYF5 915 aa15.16■□□□□ 0.02
SPDL1-206ENST00000507232 MBD4O95243 580 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 BCAMP50895 628 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 RASGRF1Q13972 1273 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 STK38Q15208 465 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 SF3A1Q15459 793 aaKnown RBP15.15■□□□□ 0.02
SPDL1-206ENST00000507232 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 CCDC186Q7Z3E2 898 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 SPATA5Q8NB90 893 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 TACC3Q9Y6A5 838 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
SPDL1-206ENST00000507232 TCRBV5S4A2TA0A5A2 114 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 CDC27P30260 824 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 EVCP57679 992 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 TTF1Q15361 905 aaPredicted RBP15.14■□□□□ 0.01
SPDL1-206ENST00000507232 RRP12Q5JTH9 1297 aaKnown RBP15.14■□□□□ 0.01
SPDL1-206ENST00000507232 NFXL1Q6ZNB6 911 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 LPIN2Q92539 896 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 ZKSCAN3Q9BRR0 538 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 KINO60870 393 aaKnown RBP15.14■□□□□ 0.01
SPDL1-206ENST00000507232 ARID4AP29374 1257 aaPredicted RBP15.14■□□□□ 0.01
SPDL1-206ENST00000507232 ZNF75DP51815 510 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 NDUFA8P51970 172 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 ITPK1Q13572 414 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 MIGA1Q8NAN2 632 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 STRBPQ96SI9 672 aaKnown RBP15.14■□□□□ 0.01
SPDL1-206ENST00000507232 EPB41L4AQ9HCS5 686 aaPredicted RBP15.14■□□□□ 0.01
SPDL1-206ENST00000507232 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
SPDL1-206ENST00000507232 ERVV-1B6SEH8 477 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 FGFR2P21802 821 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 METAP2P50579 478 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 DDB1Q16531 1140 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 TICAM2Q86XR7 235 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 ENGASEQ8NFI3 743 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 FBXO18Q8NFZ0 1043 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 CCDC87Q9NVE4 849 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 NIP7Q9Y221 180 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 SH2B2O14492 632 aaPredicted RBP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 SLC5A1P13866 664 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 MARCKSP29966 332 aaPredicted RBP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 FAM160A1Q05DH4 1040 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 UBE3CQ15386 1083 aa15.13■□□□□ 0.01
SPDL1-206ENST00000507232 TDRD7Q8NHU6 1098 aaKnown RBP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
SPDL1-206ENST00000507232 COL14A1Q05707 1796 aaKnown RBP15.12■□□□□ 0.01
SPDL1-206ENST00000507232 COL16A1Q07092 1604 aaPredicted RBP15.12■□□□□ 0.01
SPDL1-206ENST00000507232 MROH5Q6ZUA9 1318 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 BIN1O00499 593 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 KCNQ2O43526 872 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 ISM2Q6H9L7 571 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 CCDC82Q8N4S0 544 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 MARCH10Q8NA82 808 aaPredicted RBP15.12■□□□□ 0.01
SPDL1-206ENST00000507232 LINC00301Q8NCQ3 95 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 MRPS27Q92552 414 aaKnown RBP15.12■□□□□ 0.01
SPDL1-206ENST00000507232 ALG1Q9BT22 464 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 ABCC12Q96J65 1359 aa15.12■□□□□ 0.01
SPDL1-206ENST00000507232 GOLGA6L6A8MZA4 724 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 GOLGA6L19H0YKK7 550 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 SMIM22K7EJ46 135 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 DHX16O60231 1041 aaKnown RBP15.11■□□□□ 0.01
SPDL1-206ENST00000507232 IQCB1Q15051 598 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 CCDC144BQ3MJ40 725 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 MYSM1Q5VVJ2 828 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 IFNL3Q8IZI9 196 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 CMTR1Q8N1G2 835 aaKnown RBP15.11■□□□□ 0.01
SPDL1-206ENST00000507232 LCORLQ8N3X6 602 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 FBXL16Q8N461 479 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 KIAA1524Q8TCG1 905 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 SDF4Q9BRK5 362 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 NAPBQ9H115 298 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 RTEL1Q9NZ71 1219 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 COL4A1P02462 1669 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 C4AP0C0L4 1744 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
SPDL1-206ENST00000507232 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms