RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 SUGT1Q9Y2Z0 365 aa16.1■□□□□ 0.17
SNHG4-204ENST00000507197 MAST3O60307 1309 aa16.1■□□□□ 0.17
SNHG4-204ENST00000507197 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
SNHG4-204ENST00000507197 ECM29Q5VYK3 1845 aa16.1■□□□□ 0.17
SNHG4-204ENST00000507197 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
SNHG4-204ENST00000507197 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
SNHG4-204ENST00000507197 LRRC24Q50LG9 513 aa16.09■□□□□ 0.17
SNHG4-204ENST00000507197 TEKT1Q969V4 418 aa16.09■□□□□ 0.17
SNHG4-204ENST00000507197 HOOK2Q96ED9 719 aa16.09■□□□□ 0.17
SNHG4-204ENST00000507197 MRIQ9BWK5 157 aa16.09■□□□□ 0.17
SNHG4-204ENST00000507197 USP44Q9H0E7 712 aa16.09■□□□□ 0.17
SNHG4-204ENST00000507197 TMOD2Q9NZR1 351 aa16.09■□□□□ 0.17
SNHG4-204ENST00000507197 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
SNHG4-204ENST00000507197 VGLL2Q8N8G2 317 aa16.08■□□□□ 0.16
SNHG4-204ENST00000507197 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.16
SNHG4-204ENST00000507197 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
SNHG4-204ENST00000507197 AOX1Q06278 1338 aa16.08■□□□□ 0.16
SNHG4-204ENST00000507197 TCP10L2B9ZVM9 353 aa16.07■□□□□ 0.16
SNHG4-204ENST00000507197 IGF2BP3O00425 579 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNHG4-204ENST00000507197 CT47B1P0C2W7 299 aaPredicted RBP16.07■□□□□ 0.16
SNHG4-204ENST00000507197 ERO1AQ96HE7 468 aa16.07■□□□□ 0.16
SNHG4-204ENST00000507197 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
SNHG4-204ENST00000507197 SMC4Q9NTJ3 1288 aa16.07■□□□□ 0.16
SNHG4-204ENST00000507197 CSADQ9Y600 493 aa16.07■□□□□ 0.16
SNHG4-204ENST00000507197 TESPA1A2RU30 521 aaPredicted RBP16.06■□□□□ 0.16
SNHG4-204ENST00000507197 EYA2O00167 538 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 SLC5A1P13866 664 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 MAP3K9P80192 1104 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 LPIN2Q92539 896 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 OPTNQ96CV9 577 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 ZDHHC15Q96MV8 337 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 TEPSINQ96N21 525 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 ELP3Q9H9T3 547 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
SNHG4-204ENST00000507197 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
SNHG4-204ENST00000507197 BCAMP50895 628 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 GTF2A2P52657 109 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 ARHGEF6Q15052 776 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 FKBP1CQ5VVH2 108 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 KLHDC4Q8TBB5 520 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 WDR66Q8TBY9 1149 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 ARAP2Q8WZ64 1704 aa16.05■□□□□ 0.16
SNHG4-204ENST00000507197 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
SNHG4-204ENST00000507197 FGFR2P21802 821 aa16.04■□□□□ 0.16
SNHG4-204ENST00000507197 GJA5P36382 358 aa16.04■□□□□ 0.16
SNHG4-204ENST00000507197 CRHR2Q13324 411 aa16.04■□□□□ 0.16
SNHG4-204ENST00000507197 INTS3Q68E01 1043 aaKnown RBP16.04■□□□□ 0.16
SNHG4-204ENST00000507197 HHIPL2Q6UWX4 724 aa16.04■□□□□ 0.16
SNHG4-204ENST00000507197 FAM83AQ86UY5 434 aa16.04■□□□□ 0.16
SNHG4-204ENST00000507197 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNHG4-204ENST00000507197 SLC34A2O95436 690 aa16.03■□□□□ 0.16
SNHG4-204ENST00000507197 SP3Q02447 781 aa16.03■□□□□ 0.16
SNHG4-204ENST00000507197 VGLL4Q14135 290 aa16.03■□□□□ 0.16
SNHG4-204ENST00000507197 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.03■□□□□ 0.16
SNHG4-204ENST00000507197 OTOP1Q7RTM1 612 aa16.03■□□□□ 0.16
SNHG4-204ENST00000507197 GNL3LQ9NVN8 582 aaKnown RBP16.03■□□□□ 0.16
SNHG4-204ENST00000507197 CIAO1O76071 339 aa16.02■□□□□ 0.16
SNHG4-204ENST00000507197 RFX5P48382 616 aaPredicted RBP16.02■□□□□ 0.16
SNHG4-204ENST00000507197 GRIK5Q16478 980 aa16.02■□□□□ 0.16
SNHG4-204ENST00000507197 DCAF15Q66K64 600 aa16.02■□□□□ 0.16
SNHG4-204ENST00000507197 MS4A4AQ96JQ5 239 aa16.02■□□□□ 0.16
SNHG4-204ENST00000507197 PTPN18Q99952 460 aa16.02■□□□□ 0.16
SNHG4-204ENST00000507197 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.16
SNHG4-204ENST00000507197 ZFYVE28Q9HCC9 887 aa16.02■□□□□ 0.16
SNHG4-204ENST00000507197 CCL15-CCL14A0A0B4J2E2 113 aa16.01■□□□□ 0.15
SNHG4-204ENST00000507197 CCL15Q16663 113 aa16.01■□□□□ 0.15
SNHG4-204ENST00000507197 PRPF38BQ5VTL8 546 aaKnown RBP16.01■□□□□ 0.15
SNHG4-204ENST00000507197 APOBEC3HQ6NTF7 200 aaKnown RBP16.01■□□□□ 0.15
SNHG4-204ENST00000507197 CDAN1Q8IWY9 1227 aa16.01■□□□□ 0.15
SNHG4-204ENST00000507197 EFCC1Q9HA90 598 aa16.01■□□□□ 0.15
SNHG4-204ENST00000507197 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
SNHG4-204ENST00000507197 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
SNHG4-204ENST00000507197 LAMB1P07942 1786 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 SPDYE5A6NIY4 337 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 CETPP11597 493 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 CACNB3P54284 484 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 TAF1CQ15572 869 aaPredicted RBP16■□□□□ 0.15
SNHG4-204ENST00000507197 ERO1BQ86YB8 467 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
SNHG4-204ENST00000507197 OTUD5Q96G74 571 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 CDCA7LQ96GN5 454 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 WRNIP1Q96S55 665 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 ZCCHC17Q9NP64 241 aaKnown RBP16■□□□□ 0.15
SNHG4-204ENST00000507197 PTPN22Q9Y2R2 807 aa16■□□□□ 0.15
SNHG4-204ENST00000507197 TNRC18O15417 2968 aaPredicted RBP16■□□□□ 0.15
SNHG4-204ENST00000507197 SEMA3EO15041 775 aa15.99■□□□□ 0.15
SNHG4-204ENST00000507197 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
SNHG4-204ENST00000507197 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
SNHG4-204ENST00000507197 ATG9AQ7Z3C6 839 aa15.99■□□□□ 0.15
SNHG4-204ENST00000507197 CD99L2Q8TCZ2 262 aa15.99■□□□□ 0.15
SNHG4-204ENST00000507197 BRI3BPQ8WY22 251 aa15.99■□□□□ 0.15
SNHG4-204ENST00000507197 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
SNHG4-204ENST00000507197 LDHBP07195 334 aaKnown RBP15.98■□□□□ 0.15
SNHG4-204ENST00000507197 SNAPC2Q13487 334 aa15.98■□□□□ 0.15
SNHG4-204ENST00000507197 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
SNHG4-204ENST00000507197 FAM151AQ8WW52 585 aa15.98■□□□□ 0.15
SNHG4-204ENST00000507197 ZNF341Q9BYN7 854 aa15.98■□□□□ 0.15
SNHG4-204ENST00000507197 SIL1Q9H173 461 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms