RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TEKT1Q969V4 418 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 HOOK2Q96ED9 719 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 ZDHHC15Q96MV8 337 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 HAUS7Q99871 368 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 DBNDD2Q9BQY9 259 aa10.3□□□□□ -0.76
PDGFC-205ENST00000506880 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.76
PDGFC-205ENST00000506880 CAPN15O75808 1086 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 MX1P20591 662 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 KLRK1P26718 216 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 ANKRD45Q5TZF3 282 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 APOBEC3FQ8IUX4 373 aaKnown RBP10.29□□□□□ -0.76
PDGFC-205ENST00000506880 MICALL2Q8IY33 904 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 SMC1BQ8NDV3 1235 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
PDGFC-205ENST00000506880 MYOZ2Q9NPC6 264 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 PPP4R2Q9NY27 417 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 HMG20BQ9P0W2 317 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 GJA3Q9Y6H8 435 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 GAKO14976 1311 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 SALL3Q9BXA9 1300 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 AK9Q5TCS8 1911 aa10.29□□□□□ -0.76
PDGFC-205ENST00000506880 RPAP1Q9BWH6 1393 aaPredicted RBP10.28□□□□□ -0.76
PDGFC-205ENST00000506880 ADORA1P30542 326 aa10.28□□□□□ -0.76
PDGFC-205ENST00000506880 MCAMP43121 646 aa10.28□□□□□ -0.76
PDGFC-205ENST00000506880 DLGAP5Q15398 846 aa10.28□□□□□ -0.76
PDGFC-205ENST00000506880 IL1RAPL2Q9NP60 686 aa10.28□□□□□ -0.76
PDGFC-205ENST00000506880 TTF2Q9UNY4 1162 aaKnown RBP10.28□□□□□ -0.76
PDGFC-205ENST00000506880 COL2A1P02458 1487 aaPredicted RBP10.28□□□□□ -0.76
PDGFC-205ENST00000506880 POLR2AP24928 1970 aaKnown RBP10.28□□□□□ -0.76
PDGFC-205ENST00000506880 SPDYE2BA6NHP3 402 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 POTECB2RU33 542 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 SNAP23O00161 211 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 HIP1O00291 1037 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 KIF3CO14782 793 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 EIF5BO60841 1220 aaKnown RBP10.27□□□□□ -0.77
PDGFC-205ENST00000506880 BAG3O95817 575 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 SPDYE6P0CI01 402 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 PPP4CP60510 307 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 UBE3CQ15386 1083 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 KIF4BQ2VIQ3 1234 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 FAM83AQ86UY5 434 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 DZIP1Q86YF9 867 aaKnown RBP10.27□□□□□ -0.77
PDGFC-205ENST00000506880 SP7Q8TDD2 431 aaPredicted RBP10.27□□□□□ -0.77
PDGFC-205ENST00000506880 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
PDGFC-205ENST00000506880 NOL10Q9BSC4 688 aaKnown RBP10.27□□□□□ -0.77
PDGFC-205ENST00000506880 CCDC8Q9H0W5 538 aaPredicted RBP10.27□□□□□ -0.77
PDGFC-205ENST00000506880 TMOD2Q9NZR1 351 aa10.27□□□□□ -0.77
PDGFC-205ENST00000506880 FOCADQ5VW36 1801 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 WTIPA6NIX2 430 aaPredicted RBP10.26□□□□□ -0.77
PDGFC-205ENST00000506880 IGHDP01880 384 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 TNNI2P48788 182 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 NT5C2P49902 561 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 PDE1AP54750 535 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 FKBP1BP68106 108 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 CDC37L1Q7L3B6 337 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 CERS5Q8N5B7 392 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 EVI5LQ96CN4 794 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 RRAGCQ9HB90 399 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 PAG1Q9NWQ8 432 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 LRP2BPQ9P2M1 347 aa10.26□□□□□ -0.77
PDGFC-205ENST00000506880 GPR75-ASB3A0A0A6YYF3 556 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 WNT10BO00744 389 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 CYP2E1P05181 493 aaPredicted RBP10.25□□□□□ -0.77
PDGFC-205ENST00000506880 EPS15P42566 896 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 CRKP46108 304 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 CHAF1AQ13111 956 aaPredicted RBP10.25□□□□□ -0.77
PDGFC-205ENST00000506880 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 SLC51AQ86UW1 340 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 KIAA0825Q8IV33 1275 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 KBTBD3Q8NAB2 608 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 DCPSQ96C86 337 aaKnown RBP10.25□□□□□ -0.77
PDGFC-205ENST00000506880 NSUN4Q96CB9 384 aaKnown RBP10.25□□□□□ -0.77
PDGFC-205ENST00000506880 IDI2Q9BXS1 227 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 MROH7-TTC4A0A0A0MT08 1334 aa10.25□□□□□ -0.77
PDGFC-205ENST00000506880 MYO5AQ9Y4I1 1855 aaKnown RBP10.24□□□□□ -0.77
PDGFC-205ENST00000506880 ENTPD3O75355 529 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
PDGFC-205ENST00000506880 CFAP100Q494V2 611 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 NAA16Q6N069 864 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-205ENST00000506880 SULF1Q8IWU6 871 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 CNTROBQ8N137 903 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 PI4K2BQ8TCG2 481 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 FBXW7Q969H0 707 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 HHIPL1Q96JK4 782 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 NMRK2Q9NPI5 230 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 KCNQ5Q9NR82 932 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 ABCF2Q9UG63 623 aa10.24□□□□□ -0.77
PDGFC-205ENST00000506880 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-205ENST00000506880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.24□□□□□ -0.77
PDGFC-205ENST00000506880 GNAT2P19087 354 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 PRDX5P30044 214 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 NF2P35240 595 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 ZAP70P43403 619 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 MECOMQ03112 1051 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 SUPT20HL1Q3ZLR7 823 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 GIMAP6Q6P9H5 292 aa10.23□□□□□ -0.77
PDGFC-205ENST00000506880 PLEKHM2Q8IWE5 1019 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms