RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.24□□□□□ -1.25
HERC6-207ENST00000506842 FHOD3Q2V2M9 1422 aa7.24□□□□□ -1.25
HERC6-207ENST00000506842 ERBB4Q15303 1308 aa7.24□□□□□ -1.25
HERC6-207ENST00000506842 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 SRSF11Q05519 484 aaKnown RBP7.23□□□□□ -1.25
HERC6-207ENST00000506842 ADAMTSL4Q6UY14 1074 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 USP48Q86UV5 1035 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 ZNF654Q8IZM8 581 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 GOLGA6L1Q8N7Z2 621 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 ADAM19Q9H013 955 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 CCSER2Q9H7U1 834 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 GGA1Q9UJY5 639 aa7.23□□□□□ -1.25
HERC6-207ENST00000506842 GDF2Q9UK05 429 aaPredicted RBP7.23□□□□□ -1.25
HERC6-207ENST00000506842 FMN1Q68DA7 1419 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 KRT76Q01546 638 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 FAAP100Q0VG06 881 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 CCDC85BQ15834 202 aaPredicted RBP7.22□□□□□ -1.25
HERC6-207ENST00000506842 CEP135Q66GS9 1140 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 ELMSAN1Q6PJG2 1045 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 SLC43A3Q8NBI5 491 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 NECAB3Q96P71 396 aaPredicted RBP7.22□□□□□ -1.25
HERC6-207ENST00000506842 CEP44Q9C0F1 390 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 SMG9Q9H0W8 520 aaKnown RBP7.22□□□□□ -1.25
HERC6-207ENST00000506842 MUC3BQ9H195 1237 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 ACBD3Q9H3P7 528 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 SOX13Q9UN79 622 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 CDK11AQ9UQ88 783 aaPredicted RBP7.22□□□□□ -1.25
HERC6-207ENST00000506842 PCDHGB7Q9Y5F8 929 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 NEO1Q92859 1461 aa7.22□□□□□ -1.25
HERC6-207ENST00000506842 FBXO24O75426 580 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 PTPRAP18433 802 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 ZNF787Q6DD87 383 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 ASAP3Q8TDY4 903 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 SREK1Q8WXA9 508 aaKnown RBP7.21□□□□□ -1.26
HERC6-207ENST00000506842 SEC31BQ9NQW1 1179 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 KBTBD4Q9NVX7 518 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 STARD13Q9Y3M8 1113 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 ARHGAP35Q9NRY4 1499 aa7.21□□□□□ -1.26
HERC6-207ENST00000506842 ENC1O14682 589 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 RAPGEF3O95398 923 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 EPXP11678 715 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 RLBP1P12271 317 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 PWP1Q13610 501 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 PSAPL1Q6NUJ1 521 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 TPTE2Q6XPS3 522 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 C20orf204Q6ZNR8 217 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 VN1R5Q7Z5H4 357 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 SLC16A10Q8TF71 515 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 ACDQ96AP0 544 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 TRIM56Q9BRZ2 755 aaKnown RBP7.2□□□□□ -1.26
HERC6-207ENST00000506842 CLEC4MQ9H2X3 399 aaPredicted RBP7.2□□□□□ -1.26
HERC6-207ENST00000506842 TRIM33Q9UPN9 1127 aa7.2□□□□□ -1.26
HERC6-207ENST00000506842 CELA3AP09093 270 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 GRIK5Q16478 980 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 CACTIN-AS1Q8N1I8 211 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 MICALL1Q8N3F8 863 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 PHC3Q8NDX5 983 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 IRF7Q92985 503 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 TMEM74Q96NL1 305 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 KCNQ5Q9NR82 932 aa7.19□□□□□ -1.26
HERC6-207ENST00000506842 PLCH2O75038 1416 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 ADAMTS2O95450 1211 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 B3GALT4O96024 378 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 ALAS2P22557 587 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 GJA8P48165 433 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 TNNI2P48788 182 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 PCDH1Q08174 1060 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 ZNF423Q2M1K9 1284 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 C1orf229Q6ZS94 237 aaPredicted RBP7.18□□□□□ -1.26
HERC6-207ENST00000506842 RELL1Q8IUW5 271 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 RHOVQ96L33 236 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 CAPN10Q9HC96 672 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 AKNAQ7Z591 1439 aa7.18□□□□□ -1.26
HERC6-207ENST00000506842 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.17□□□□□ -1.26
HERC6-207ENST00000506842 RGS9O75916 674 aaPredicted RBP7.17□□□□□ -1.26
HERC6-207ENST00000506842 SLURP2P0DP57 97 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 ESRRAP11474 423 aaPredicted RBP7.17□□□□□ -1.26
HERC6-207ENST00000506842 CDC27P30260 824 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 LIG3P49916 1009 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 SF3A1Q15459 793 aaKnown RBP7.17□□□□□ -1.26
HERC6-207ENST00000506842 EFCAB2Q5VUJ9 269 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 DRC1Q96MC2 740 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 GMLQ99445 158 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 LACRTQ9GZZ8 138 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 LRRC4BQ9NT99 713 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 TMEM39AQ9NV64 488 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 USP35Q9P2H5 1018 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 ADAMTS1Q9UHI8 967 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 ADGRL1O94910 1474 aa7.17□□□□□ -1.26
HERC6-207ENST00000506842 PAGE1O75459 146 aa7.16□□□□□ -1.26
HERC6-207ENST00000506842 ALBP02768 609 aa7.16□□□□□ -1.26
HERC6-207ENST00000506842 GBP2P32456 591 aaPredicted RBP7.16□□□□□ -1.26
HERC6-207ENST00000506842 RPS26P62854 115 aaKnown RBP7.16□□□□□ -1.26
HERC6-207ENST00000506842 AGMOQ6ZNB7 445 aa7.16□□□□□ -1.26
HERC6-207ENST00000506842 SH2B1Q9NRF2 756 aaPredicted RBP7.16□□□□□ -1.26
HERC6-207ENST00000506842 GPN3Q9UHW5 284 aaPredicted RBP7.16□□□□□ -1.26
HERC6-207ENST00000506842 INPP5FQ9Y2H2 1132 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms