RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
SERF1B-204ENST00000506542 PGAP2Q9UHJ9 254 aa16.9■□□□□ 0.3
SERF1B-204ENST00000506542 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
SERF1B-204ENST00000506542 PRAMEF18Q5VWM3 479 aa16.89■□□□□ 0.29
SERF1B-204ENST00000506542 CST9Q5W186 159 aa16.89■□□□□ 0.29
SERF1B-204ENST00000506542 TSHZ3Q63HK5 1081 aa16.89■□□□□ 0.29
SERF1B-204ENST00000506542 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
SERF1B-204ENST00000506542 TTC41PQ6P2S7 1318 aa16.89■□□□□ 0.29
SERF1B-204ENST00000506542 MYO3BQ8WXR4 1341 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 WNT10BO00744 389 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 SEC24BO95487 1268 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
SERF1B-204ENST00000506542 AACSQ86V21 672 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
SERF1B-204ENST00000506542 XAGE2Q96GT9 111 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 CDC45O75419 566 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 SDSP20132 328 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 CCDC102BQ68D86 513 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
SERF1B-204ENST00000506542 PI4K2BQ8TCG2 481 aa16.87■□□□□ 0.29
SERF1B-204ENST00000506542 ZC3H15Q8WU90 426 aaKnown RBP16.87■□□□□ 0.29
SERF1B-204ENST00000506542 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
SERF1B-204ENST00000506542 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
SERF1B-204ENST00000506542 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
SERF1B-204ENST00000506542 ECM29Q5VYK3 1845 aa16.86■□□□□ 0.29
SERF1B-204ENST00000506542 CFAP100Q494V2 611 aa16.86■□□□□ 0.29
SERF1B-204ENST00000506542 TNNI3KQ59H18 835 aa16.86■□□□□ 0.29
SERF1B-204ENST00000506542 TBC1D9Q6ZT07 1266 aa16.86■□□□□ 0.29
SERF1B-204ENST00000506542 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
SERF1B-204ENST00000506542 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
SERF1B-204ENST00000506542 FPGT-TNNI3KV9GXZ4 949 aa16.86■□□□□ 0.29
SERF1B-204ENST00000506542 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 TMEM88BA6NKF7 163 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 CELF2O95319 508 aaKnown RBP16.85■□□□□ 0.29
SERF1B-204ENST00000506542 RBM5P52756 815 aaKnown RBP eCLIP16.85■□□□□ 0.29
SERF1B-204ENST00000506542 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 CDC37L1Q7L3B6 337 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 ZBED3Q96IU2 234 aaPredicted RBP16.85■□□□□ 0.29
SERF1B-204ENST00000506542 PRMT6Q96LA8 375 aaPredicted RBP16.85■□□□□ 0.29
SERF1B-204ENST00000506542 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 ERC2O15083 957 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 GLRX3O76003 335 aaKnown RBP16.85■□□□□ 0.29
SERF1B-204ENST00000506542 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
SERF1B-204ENST00000506542 DBNDD2Q9BQY9 259 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 GPR108Q9NPR9 543 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 CREBZFQ9NS37 354 aa16.85■□□□□ 0.29
SERF1B-204ENST00000506542 MYO5AQ9Y4I1 1855 aaKnown RBP16.84■□□□□ 0.29
SERF1B-204ENST00000506542 PRDX5P30044 214 aa16.84■□□□□ 0.29
SERF1B-204ENST00000506542 DLGAP5Q15398 846 aa16.84■□□□□ 0.29
SERF1B-204ENST00000506542 CCDC8Q9H0W5 538 aaPredicted RBP16.84■□□□□ 0.29
SERF1B-204ENST00000506542 HDAC9Q9UKV0 1011 aa16.84■□□□□ 0.29
SERF1B-204ENST00000506542 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
SERF1B-204ENST00000506542 FKBP1AP62942 108 aaKnown RBP16.83■□□□□ 0.28
SERF1B-204ENST00000506542 UPF2Q9HAU5 1272 aaKnown RBP16.83■□□□□ 0.28
SERF1B-204ENST00000506542 ABT1Q9ULW3 272 aaKnown RBP16.83■□□□□ 0.28
SERF1B-204ENST00000506542 AKAP11Q9UKA4 1901 aa16.82■□□□□ 0.28
SERF1B-204ENST00000506542 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
SERF1B-204ENST00000506542 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
SERF1B-204ENST00000506542 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
SERF1B-204ENST00000506542 SULF1Q8IWU6 871 aa16.82■□□□□ 0.28
SERF1B-204ENST00000506542 DBNLQ9UJU6 430 aaKnown RBP16.82■□□□□ 0.28
SERF1B-204ENST00000506542 FZD1Q9UP38 647 aa16.82■□□□□ 0.28
SERF1B-204ENST00000506542 TRIM6-TRIM34B2RNG4 842 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 CRKP46108 304 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 CACNB3P54284 484 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 GORABQ5T7V8 394 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 CDCA5Q96FF9 252 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 TDRD3Q9H7E2 651 aaKnown RBP16.81■□□□□ 0.28
SERF1B-204ENST00000506542 SNRKQ9NRH2 765 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 NDUFB9Q9Y6M9 179 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 ANP32AP39687 249 aaKnown RBP16.81■□□□□ 0.28
SERF1B-204ENST00000506542 MCAMP43121 646 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 GRM1Q13255 1194 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 MOB2Q70IA6 237 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 KLRG1Q96E93 195 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 VEZTQ9HBM0 779 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 GNL3LQ9NVN8 582 aaKnown RBP16.81■□□□□ 0.28
SERF1B-204ENST00000506542 HMG20BQ9P0W2 317 aa16.81■□□□□ 0.28
SERF1B-204ENST00000506542 MYH2Q9UKX2 1941 aa16.8■□□□□ 0.28
SERF1B-204ENST00000506542 EIF5BO60841 1220 aaKnown RBP16.8■□□□□ 0.28
SERF1B-204ENST00000506542 MFAP1P55081 439 aaKnown RBP16.8■□□□□ 0.28
SERF1B-204ENST00000506542 CASC1Q6TDU7 716 aa16.8■□□□□ 0.28
SERF1B-204ENST00000506542 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
SERF1B-204ENST00000506542 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
SERF1B-204ENST00000506542 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
SERF1B-204ENST00000506542 RILPL2Q969X0 211 aa16.79■□□□□ 0.28
SERF1B-204ENST00000506542 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
SERF1B-204ENST00000506542 DENND2AQ9ULE3 1009 aa16.79■□□□□ 0.28
SERF1B-204ENST00000506542 CNTNAP1P78357 1384 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 VEGFBP49765 207 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 PRKG1Q13976 671 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 SERPINA10Q9UK55 444 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 ATP5JP18859 108 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 ARID4AP29374 1257 aaPredicted RBP16.78■□□□□ 0.28
SERF1B-204ENST00000506542 CYP4F22Q6NT55 531 aa16.78■□□□□ 0.28
SERF1B-204ENST00000506542 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms