RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 TEPSINQ96N21 525 aa11.52□□□□□ -0.57
COPS4-204ENST00000506443 LEMD3Q9Y2U8 911 aa11.52□□□□□ -0.57
COPS4-204ENST00000506443 A0A0C4DFX4 3053 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 PI4KAP2A4QPH2 592 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 H7C1W4 665 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 ITGA6P23229 1130 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 CACNB3P54284 484 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 INHBEP58166 350 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 GNAI1P63096 354 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 PI4KAP1Q8N8J0 262 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 SLC17A8Q8NDX2 589 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 TMEM39BQ9GZU3 492 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 MGAMO43451 1857 aa11.51□□□□□ -0.57
COPS4-204ENST00000506443 APAF1O14727 1248 aa11.5□□□□□ -0.57
COPS4-204ENST00000506443 PPP1R12BO60237 982 aaPredicted RBP11.5□□□□□ -0.57
COPS4-204ENST00000506443 DDX58O95786 925 aaKnown RBP11.5□□□□□ -0.57
COPS4-204ENST00000506443 IREB2P48200 963 aaKnown RBP11.5□□□□□ -0.57
COPS4-204ENST00000506443 CASP7P55210 303 aa11.5□□□□□ -0.57
COPS4-204ENST00000506443 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
COPS4-204ENST00000506443 UBE2Q1Q7Z7E8 422 aa11.5□□□□□ -0.57
COPS4-204ENST00000506443 ANKRD13AQ8IZ07 590 aa11.5□□□□□ -0.57
COPS4-204ENST00000506443 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
COPS4-204ENST00000506443 TDRD3Q9H7E2 651 aaKnown RBP11.5□□□□□ -0.57
COPS4-204ENST00000506443 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
COPS4-204ENST00000506443 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
COPS4-204ENST00000506443 TCP10L2B9ZVM9 353 aa11.49□□□□□ -0.57
COPS4-204ENST00000506443 CSF1RP07333 972 aa11.49□□□□□ -0.57
COPS4-204ENST00000506443 LACTBP83111 547 aaPredicted RBP11.49□□□□□ -0.57
COPS4-204ENST00000506443 CCDC30Q5VVM6 783 aa11.49□□□□□ -0.57
COPS4-204ENST00000506443 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.57
COPS4-204ENST00000506443 DPF3Q92784 378 aa11.49□□□□□ -0.57
COPS4-204ENST00000506443 ZNF70Q9UC06 446 aaPredicted RBP11.49□□□□□ -0.57
COPS4-204ENST00000506443 UNCXA6NJT0 531 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 BTBD19C9JJ37 291 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 IGHMBP2P38935 993 aaKnown RBP11.48□□□□□ -0.57
COPS4-204ENST00000506443 KCNJ4P48050 445 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
COPS4-204ENST00000506443 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
COPS4-204ENST00000506443 Q7L0L9 218 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 TSR2Q969E8 191 aaKnown RBP11.48□□□□□ -0.57
COPS4-204ENST00000506443 ZNF594Q96JF6 807 aaPredicted RBP11.48□□□□□ -0.57
COPS4-204ENST00000506443 TRIM47Q96LD4 638 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 PLA2G12BQ9BX93 195 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 ANKRD2Q9GZV1 360 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 CPA4Q9UI42 421 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 PPP2R3BQ9Y5P8 575 aa11.48□□□□□ -0.57
COPS4-204ENST00000506443 ADGRA2Q96PE1 1338 aa11.47□□□□□ -0.57
COPS4-204ENST00000506443 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
COPS4-204ENST00000506443 ZBTB7BO15156 539 aaPredicted RBP11.46□□□□□ -0.57
COPS4-204ENST00000506443 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
COPS4-204ENST00000506443 OSBPP22059 807 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 CALD1Q05682 793 aaKnown RBP11.46□□□□□ -0.57
COPS4-204ENST00000506443 GCKRQ14397 625 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 SUPT20HL1Q3ZLR7 823 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 OTUD7BQ6GQQ9 843 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 C15orf52Q6ZUT6 534 aaKnown RBP11.46□□□□□ -0.57
COPS4-204ENST00000506443 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.57
COPS4-204ENST00000506443 CHMP4AQ9BY43 222 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.57
COPS4-204ENST00000506443 IQSEC3Q9UPP2 1182 aaPredicted RBP11.46□□□□□ -0.57
COPS4-204ENST00000506443 UNC80Q8N2C7 3258 aa11.46□□□□□ -0.58
COPS4-204ENST00000506443 SPDYE5A6NIY4 337 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 IRF6O14896 467 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 TLR2O60603 784 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 CCL5P13501 91 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 IL1R1P14778 569 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 GYG1P46976 350 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 NEXNQ0ZGT2 675 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
COPS4-204ENST00000506443 MPHOSPH8Q99549 860 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 UNC93B1Q9H1C4 597 aa11.45□□□□□ -0.58
COPS4-204ENST00000506443 PLIN1O60240 522 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 GTF2A2P52657 109 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 PRKCZQ05513 592 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 MFSD14BQ5SR56 506 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 STAP2Q9UGK3 403 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 GABRQQ9UN88 632 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 TTF2Q9UNY4 1162 aaKnown RBP11.44□□□□□ -0.58
COPS4-204ENST00000506443 PTPRFP10586 1907 aa11.44□□□□□ -0.58
COPS4-204ENST00000506443 DOCK3Q8IZD9 2030 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 MYPNQ86TC9 1320 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 MYO1BO43795 1136 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 FARP2O94887 1054 aaPredicted RBP11.43□□□□□ -0.58
COPS4-204ENST00000506443 SLURP2P0DP57 97 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 ELNP15502 786 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 INPP5BP32019 993 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 PSMC4P43686 418 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 FKBP1AP62942 108 aaKnown RBP11.43□□□□□ -0.58
COPS4-204ENST00000506443 FOXO4P98177 505 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
COPS4-204ENST00000506443 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
COPS4-204ENST00000506443 WRNIP1Q96S55 665 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
COPS4-204ENST00000506443 SRRDQ9UH36 339 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 RIPOR2Q9Y4F9 1068 aa11.43□□□□□ -0.58
COPS4-204ENST00000506443 DDX60LQ5H9U9 1706 aaKnown RBP11.43□□□□□ -0.58
COPS4-204ENST00000506443 GRK4P32298 578 aa11.42□□□□□ -0.58
COPS4-204ENST00000506443 CRKP46108 304 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms