RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 NSUN4Q96CB9 384 aaKnown RBP21.34■■□□□ 1.01
ITGA3-207ENST00000506401 TBC1D2Q9BYX2 928 aa21.34■■□□□ 1.01
ITGA3-207ENST00000506401 CTNNA3Q9UI47 895 aa21.34■■□□□ 1.01
ITGA3-207ENST00000506401 PRDX5P30044 214 aa21.33■■□□□ 1.01
ITGA3-207ENST00000506401 PTGER2P43116 358 aa21.33■■□□□ 1.01
ITGA3-207ENST00000506401 MECOMQ03112 1051 aa21.33■■□□□ 1.01
ITGA3-207ENST00000506401 STRBPQ96SI9 672 aaKnown RBP21.33■■□□□ 1.01
ITGA3-207ENST00000506401 FAM205AQ6ZU69 1335 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 MBD4O95243 580 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 DOK7Q18PE1 504 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 SOGA3Q5TF21 947 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 DZIP1Q86YF9 867 aaKnown RBP21.32■■□□□ 1
ITGA3-207ENST00000506401 CHD4Q14839 1912 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 GNAT2P19087 354 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 NEK4P51957 841 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 KLHL34Q8N239 644 aa21.32■■□□□ 1
ITGA3-207ENST00000506401 MAGEB6P1A0A0J9YX57 407 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 PSMA5P28066 241 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 SLC4A3P48751 1232 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 GSTO1P78417 241 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 DALRD3Q5D0E6 543 aaKnown RBP21.31■■□□□ 1
ITGA3-207ENST00000506401 PODNQ7Z5L7 613 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 ARMT1Q9H993 441 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 MAST2Q6P0Q8 1798 aa21.31■■□□□ 1
ITGA3-207ENST00000506401 PATL2C9JE40 543 aaKnown RBP21.3■■□□□ 1
ITGA3-207ENST00000506401 APPP05067 770 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 GTF2IP78347 998 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 KRT32Q14532 448 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 ILDR2Q71H61 639 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 MIGA1Q8NAN2 632 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 TM6SF1Q9BZW5 370 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 SPON1Q9HCB6 807 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 SNED1Q8TER0 1413 aa21.3■■□□□ 1
ITGA3-207ENST00000506401 MFSD14BQ5SR56 506 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 FGAP02671 866 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 LDHCP07864 332 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 TTLL5Q6EMB2 1281 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 ADGRA1Q86SQ6 560 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 ZNF384Q8TF68 577 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 FBXW7Q969H0 707 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
ITGA3-207ENST00000506401 PSMD1Q99460 953 aa21.29■■□□□ 1
ITGA3-207ENST00000506401 FOXP2O15409 715 aa21.28■■□□□ 1
ITGA3-207ENST00000506401 CYP21A2P08686 494 aa21.28■■□□□ 1
ITGA3-207ENST00000506401 CASTP20810 708 aaKnown RBP21.28■■□□□ 1
ITGA3-207ENST00000506401 KIAA2012Q0VF49 1180 aa21.28■■□□□ 1
ITGA3-207ENST00000506401 IMMTQ16891 758 aaKnown RBP21.28■■□□□ 1
ITGA3-207ENST00000506401 LCORLQ8N3X6 602 aa21.28■■□□□ 1
ITGA3-207ENST00000506401 RPAP1Q9BWH6 1393 aaPredicted RBP21.27■■□□□ 1
ITGA3-207ENST00000506401 ALX1Q15699 326 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 AOC3Q16853 763 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 SLF2Q8IX21 1173 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 UPF3BQ9BZI7 483 aaKnown RBP21.27■■□□□ 1
ITGA3-207ENST00000506401 DBNDD1Q9H9R9 158 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 SUGT1Q9Y2Z0 365 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 CYP46A1Q9Y6A2 500 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 SLC4A4Q9Y6R1 1079 aa21.27■■□□□ 1
ITGA3-207ENST00000506401 BRCA1P38398 1863 aaKnown RBP21.27■■□□□ 1
ITGA3-207ENST00000506401 MCM2P49736 904 aa21.27■□□□□ 0.99
ITGA3-207ENST00000506401 ADCK5Q3MIX3 580 aa21.27■□□□□ 0.99
ITGA3-207ENST00000506401 NACAP1Q9BZK3 213 aa21.27■□□□□ 0.99
ITGA3-207ENST00000506401 ZSWIM6Q9HCJ5 1215 aa21.27■□□□□ 0.99
ITGA3-207ENST00000506401 PPIP5K2O43314 1243 aa21.26■□□□□ 0.99
ITGA3-207ENST00000506401 ECE2O60344 883 aa21.26■□□□□ 0.99
ITGA3-207ENST00000506401 CD2BP2O95400 341 aaKnown RBP21.26■□□□□ 0.99
ITGA3-207ENST00000506401 RIOK1Q9BRS2 568 aaKnown RBP21.26■□□□□ 0.99
ITGA3-207ENST00000506401 VPS33BQ9H267 617 aa21.26■□□□□ 0.99
ITGA3-207ENST00000506401 MYH2Q9UKX2 1941 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 K7ELQ4 463 aaPredicted RBP21.25■□□□□ 0.99
ITGA3-207ENST00000506401 ZNF213O14771 459 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 NOL10Q9BSC4 688 aaKnown RBP21.25■□□□□ 0.99
ITGA3-207ENST00000506401 ZMYM6O95789 1325 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 GSG1L2A8MUP6 293 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 DYNLL1P63167 89 aaKnown RBP21.25■□□□□ 0.99
ITGA3-207ENST00000506401 GRIK5Q16478 980 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 BLOC1S2Q6QNY1 142 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 RUFY3Q7L099 469 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 IFNL3Q8IZI9 196 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 NAPBQ9H115 298 aa21.25■□□□□ 0.99
ITGA3-207ENST00000506401 BAG3O95817 575 aa21.24■□□□□ 0.99
ITGA3-207ENST00000506401 NEK1Q96PY6 1258 aa21.24■□□□□ 0.99
ITGA3-207ENST00000506401 AATFQ9NY61 560 aaKnown RBP eCLIP21.24■□□□□ 0.99
ITGA3-207ENST00000506401 TAF6LQ9Y6J9 622 aa21.24■□□□□ 0.99
ITGA3-207ENST00000506401 PRKAB2O43741 272 aa21.23■□□□□ 0.99
ITGA3-207ENST00000506401 STRIP1Q5VSL9 837 aa21.23■□□□□ 0.99
ITGA3-207ENST00000506401 CRNKL1Q9BZJ0 848 aaKnown RBP21.23■□□□□ 0.99
ITGA3-207ENST00000506401 PDRG1Q9NUG6 133 aa21.23■□□□□ 0.99
ITGA3-207ENST00000506401 TDO2P48775 406 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 CERS3Q8IU89 383 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 MROH7-TTC4A0A0A0MT08 1334 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 USP17L3A6NCW0 530 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 USP17L4A6NCW7 530 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 HMGB1P09429 215 aaKnown RBP21.22■□□□□ 0.99
ITGA3-207ENST00000506401 FKBP1AP62942 108 aaKnown RBP21.22■□□□□ 0.99
ITGA3-207ENST00000506401 DIXDC1Q155Q3 683 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 USP17L1Q7RTZ2 530 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 BCS1LQ9Y276 419 aa21.22■□□□□ 0.99
ITGA3-207ENST00000506401 E7EWF7 191 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms