RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 FAM50BQ9Y247 325 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 MYBBP1AQ9BQG0 1328 aaKnown RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 HAX1O00165 279 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 NRDCO43847 1150 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 FDX1P10109 184 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 PPP2R1AP30153 589 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 USP5P45974 858 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 RGL3Q3MIN7 710 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 SASS6Q6UVJ0 657 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 HNRNPLLQ8WVV9 542 aaKnown RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 HIRIP3Q9BW71 556 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 CCDC196A0A1B0GTZ2 297 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 SLC27A2O14975 620 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 FMNL1O95466 1100 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 CCT2P78371 535 aaKnown RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 SH3PXD2AQ5TCZ1 1133 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 MAF1Q9H063 256 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 CCSER2Q9H7U1 834 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 PRR12Q9ULL5 1215 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 EIF5P55010 431 aaKnown RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 LMNB2Q03252 620 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 USPL1Q5W0Q7 1092 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 SPTY2D1Q68D10 685 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 ISM2Q6H9L7 571 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 CLEC4GQ6UXB4 293 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 KRT25Q7Z3Z0 450 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 FILIP1Q7Z7B0 1213 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 ANAPC16Q96DE5 110 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 TACO1Q9BSH4 297 aaKnown RBP2.74□□□□□ -1.97
NEDD4-205ENST00000506154 SALL3Q9BXA9 1300 aa2.74□□□□□ -1.97
NEDD4-205ENST00000506154 MPSTP25325 297 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 HOXA10P31260 410 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 FKBP5Q13451 457 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 TAF7Q15545 349 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 SAMD7Q7Z3H4 446 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PXYLP1Q8TE99 480 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 TNPO1Q92973 898 aaKnown RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 LRGUKQ96M69 825 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 LNPKQ9C0E8 428 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 CWC25Q9NXE8 425 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 FLT4P35916 1363 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 DYTNA2CJ06 578 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 RECKO95980 971 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 MZF1P28698 734 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 TRPC1P48995 793 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 RNF135Q8IUD6 432 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 IRF2BPLQ9H1B7 796 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PANK3Q9H999 370 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PARP2Q9UGN5 583 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 SIPA1L1O43166 1804 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PPP2R5EQ16537 467 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 FAM26DQ5JW98 314 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF335Q9H4Z2 1342 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PPP1R3GB7ZBB8 358 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 RPS6KA5O75582 802 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 ARID4AP29374 1257 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 CHAF1AQ13111 956 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PLA2G4EQ3MJ16 856 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 MEI1Q5TIA1 1274 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 B4GALNT3Q6L9W6 998 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 ATL2Q8NHH9 583 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 JDP2Q8WYK2 163 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 GRPEL1Q9HAV7 217 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 RGS17Q9UGC6 210 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 SOWAHDA6NJG2 315 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 BCAMP50895 628 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 EAPPQ56P03 285 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 OGFRQ9NZT2 677 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 AMOTL2Q9Y2J4 779 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 LAMA4Q16363 1823 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 BBOX1O75936 387 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 ERCC3P19447 782 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 PAX7P23759 505 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 CHMP4BP1P59074 171 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 ICA1Q05084 483 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 DNAJC21Q5F1R6 531 aaKnown RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 TXNDC2Q86VQ3 553 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 STAG1Q8WVM7 1258 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 MPHOSPH6Q99547 160 aaKnown RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 MTA3Q9BTC8 594 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 IRX2Q9BZI1 471 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-205ENST00000506154 ZBTB3Q9H5J0 574 aa2.73□□□□□ -1.97
NEDD4-205ENST00000506154 UTYO14607 1347 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 GPR37L1O60883 481 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 YY1P25490 414 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 SCTRP47872 440 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 EIF4G2P78344 907 aaKnown RBP eCLIP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 SF3B2Q13435 895 aaKnown RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KLHDC4Q8TBB5 520 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 HDAC7Q8WUI4 952 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 SCG3Q8WXD2 468 aaKnown RBP2.72□□□□□ -1.97
NEDD4-205ENST00000506154 CEP89Q96ST8 783 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 KIF2CQ99661 725 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 PRM3Q9NNZ6 103 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 BABAM1Q9NWV8 329 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ZNF232Q9UNY5 417 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ZKSCAN5Q9Y2L8 839 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 CGNL1Q0VF96 1302 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 NUP98P52948 1817 aa2.72□□□□□ -1.97
NEDD4-205ENST00000506154 ARFGEF1Q9Y6D6 1849 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms