RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
BRIX1-202ENST00000506023 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
BRIX1-202ENST00000506023 SUCLG2Q96I99 432 aa13.17□□□□□ -0.3
BRIX1-202ENST00000506023 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
BRIX1-202ENST00000506023 TMEM39BQ9GZU3 492 aa13.17□□□□□ -0.3
BRIX1-202ENST00000506023 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
BRIX1-202ENST00000506023 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
BRIX1-202ENST00000506023 CACNB3P54284 484 aa13.16□□□□□ -0.3
BRIX1-202ENST00000506023 INHBEP58166 350 aa13.16□□□□□ -0.3
BRIX1-202ENST00000506023 HABP4Q5JVS0 413 aaKnown RBP13.16□□□□□ -0.3
BRIX1-202ENST00000506023 MFSD14BQ5SR56 506 aa13.16□□□□□ -0.3
BRIX1-202ENST00000506023 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
BRIX1-202ENST00000506023 TTF2Q9UNY4 1162 aaKnown RBP13.16□□□□□ -0.3
BRIX1-202ENST00000506023 IQSEC3Q9UPP2 1182 aaPredicted RBP13.16□□□□□ -0.3
BRIX1-202ENST00000506023 TRIOBPQ9H2D6 2365 aa13.16□□□□□ -0.3
BRIX1-202ENST00000506023 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 GRM8O00222 908 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
BRIX1-202ENST00000506023 VGLL4Q14135 290 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 SUPT20HL1Q3ZLR7 823 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.15□□□□□ -0.3
BRIX1-202ENST00000506023 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 ARHGAP39Q9C0H5 1083 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 PTPRFP10586 1907 aa13.15□□□□□ -0.3
BRIX1-202ENST00000506023 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
BRIX1-202ENST00000506023 CTGFP29279 349 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 IREB2P48200 963 aaKnown RBP13.14□□□□□ -0.31
BRIX1-202ENST00000506023 SP3Q02447 781 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
BRIX1-202ENST00000506023 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 EFCC1Q9HA90 598 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
BRIX1-202ENST00000506023 UNCXA6NJT0 531 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 MYO1BO43795 1136 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 CRKP46108 304 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 CNNM1Q9NRU3 951 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 SERPINA10Q9UK55 444 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 SNCAIPQ9Y6H5 919 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
BRIX1-202ENST00000506023 DOCK2Q92608 1830 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 HIBADHP31937 336 aaKnown RBP13.12□□□□□ -0.31
BRIX1-202ENST00000506023 FXR1P51114 621 aaKnown RBP eCLIP13.12□□□□□ -0.31
BRIX1-202ENST00000506023 UBE4AQ14139 1066 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 CCL15Q16663 113 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 INTS3Q68E01 1043 aaKnown RBP13.12□□□□□ -0.31
BRIX1-202ENST00000506023 FBXO33Q7Z6M2 555 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
BRIX1-202ENST00000506023 ALPK3Q96L96 1907 aa13.11□□□□□ -0.31
BRIX1-202ENST00000506023 MYCP01106 439 aaPredicted RBP13.11□□□□□ -0.31
BRIX1-202ENST00000506023 WDR63Q8IWG1 891 aa13.11□□□□□ -0.31
BRIX1-202ENST00000506023 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
BRIX1-202ENST00000506023 DOCK3Q8IZD9 2030 aa13.11□□□□□ -0.31
BRIX1-202ENST00000506023 UTYO14607 1347 aa13.11□□□□□ -0.31
BRIX1-202ENST00000506023 SPDYE5A6NIY4 337 aa13.1□□□□□ -0.31
BRIX1-202ENST00000506023 ECM2O94769 699 aaPredicted RBP13.1□□□□□ -0.31
BRIX1-202ENST00000506023 MAP3K9P80192 1104 aa13.1□□□□□ -0.31
BRIX1-202ENST00000506023 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
BRIX1-202ENST00000506023 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
BRIX1-202ENST00000506023 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
BRIX1-202ENST00000506023 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
BRIX1-202ENST00000506023 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 BTBD19C9JJ37 291 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 ALDH1L1O75891 902 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 MYCNP04198 464 aaPredicted RBP13.09□□□□□ -0.31
BRIX1-202ENST00000506023 CHAF1AQ13111 956 aaPredicted RBP13.09□□□□□ -0.31
BRIX1-202ENST00000506023 RABL6Q3YEC7 729 aaPredicted RBP13.09□□□□□ -0.31
BRIX1-202ENST00000506023 TAF7LQ5H9L4 462 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
BRIX1-202ENST00000506023 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 SHISA4Q96DD7 197 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 ADGRA2Q96PE1 1338 aa13.09□□□□□ -0.31
BRIX1-202ENST00000506023 IRF6O14896 467 aa13.08□□□□□ -0.32
BRIX1-202ENST00000506023 BCAMP50895 628 aa13.08□□□□□ -0.32
BRIX1-202ENST00000506023 MOGSQ13724 837 aa13.08□□□□□ -0.32
BRIX1-202ENST00000506023 TNFAIP1Q13829 316 aa13.08□□□□□ -0.32
BRIX1-202ENST00000506023 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.32
BRIX1-202ENST00000506023 MRS2Q9HD23 443 aa13.08□□□□□ -0.32
BRIX1-202ENST00000506023 C9orf78Q9NZ63 289 aaPredicted RBP13.08□□□□□ -0.32
BRIX1-202ENST00000506023 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
BRIX1-202ENST00000506023 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 FGFR2P21802 821 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 INPP5BP32019 993 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 GTF2A2P52657 109 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 MTFR1Q15390 333 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 ZNF521Q96K83 1311 aa13.07□□□□□ -0.32
BRIX1-202ENST00000506023 TLR2O60603 784 aa13.06□□□□□ -0.32
BRIX1-202ENST00000506023 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
BRIX1-202ENST00000506023 LACTBP83111 547 aaPredicted RBP13.06□□□□□ -0.32
BRIX1-202ENST00000506023 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms