RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 POTEFA5A3E0 1075 aa13.35□□□□□ -0.27
CPNE4-206ENST00000505957 TAF5LO75529 589 aa13.35□□□□□ -0.27
CPNE4-206ENST00000505957 USP2O75604 605 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-206ENST00000505957 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
CPNE4-206ENST00000505957 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-206ENST00000505957 HABP4Q5JVS0 413 aaKnown RBP13.35□□□□□ -0.27
CPNE4-206ENST00000505957 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
CPNE4-206ENST00000505957 ANKRD13AQ8IZ07 590 aa13.35□□□□□ -0.27
CPNE4-206ENST00000505957 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 SNAP23O00161 211 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 GJA5P36382 358 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 SP3Q02447 781 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 CRHR2Q13324 411 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 FKBP5Q13451 457 aaPredicted RBP13.34□□□□□ -0.27
CPNE4-206ENST00000505957 CD99L2Q8TCZ2 262 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 EFCC1Q9HA90 598 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 VEZTQ9HBM0 779 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 TSHZ2Q9NRE2 1034 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 PCDHB15Q9Y5E8 787 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 PCDHAC2Q9Y5I4 1007 aa13.34□□□□□ -0.27
CPNE4-206ENST00000505957 F8W031 263 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-206ENST00000505957 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-206ENST00000505957 FOXO4P98177 505 aa13.33□□□□□ -0.28
CPNE4-206ENST00000505957 TNFAIP1Q13829 316 aa13.33□□□□□ -0.28
CPNE4-206ENST00000505957 RASA3Q14644 834 aa13.33□□□□□ -0.28
CPNE4-206ENST00000505957 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-206ENST00000505957 PTPN18Q99952 460 aa13.33□□□□□ -0.28
CPNE4-206ENST00000505957 RWDD1Q9H446 243 aaPredicted RBP13.33□□□□□ -0.28
CPNE4-206ENST00000505957 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
CPNE4-206ENST00000505957 LAMB1P07942 1786 aa13.32□□□□□ -0.28
CPNE4-206ENST00000505957 ARHGEF6Q15052 776 aa13.32□□□□□ -0.28
CPNE4-206ENST00000505957 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
CPNE4-206ENST00000505957 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
CPNE4-206ENST00000505957 SERPINA10Q9UK55 444 aa13.32□□□□□ -0.28
CPNE4-206ENST00000505957 IGHDP01880 384 aa13.31□□□□□ -0.28
CPNE4-206ENST00000505957 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
CPNE4-206ENST00000505957 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
CPNE4-206ENST00000505957 OPTNQ96CV9 577 aa13.31□□□□□ -0.28
CPNE4-206ENST00000505957 AOX1Q06278 1338 aa13.31□□□□□ -0.28
CPNE4-206ENST00000505957 KIAA0100Q14667 2235 aaKnown RBP13.3□□□□□ -0.28
CPNE4-206ENST00000505957 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 BEND3Q5T5X7 828 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 LDHAL6AQ6ZMR3 332 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 TDRD7Q8NHU6 1098 aaKnown RBP13.3□□□□□ -0.28
CPNE4-206ENST00000505957 ZNF333Q96JL9 665 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 TEPSINQ96N21 525 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 ELP3Q9H9T3 547 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 ZNF70Q9UC06 446 aaPredicted RBP13.3□□□□□ -0.28
CPNE4-206ENST00000505957 CHMP3Q9Y3E7 222 aa13.3□□□□□ -0.28
CPNE4-206ENST00000505957 ECM29Q5VYK3 1845 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
CPNE4-206ENST00000505957 GTF2A2P52657 109 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 CAP1Q01518 475 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 LMBR1LQ6UX01 489 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
CPNE4-206ENST00000505957 NBPF11Q86T75 865 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 ZFYVE28Q9HCC9 887 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
CPNE4-206ENST00000505957 RBBP6Q7Z6E9 1792 aaKnown RBP13.29□□□□□ -0.28
CPNE4-206ENST00000505957 HTTP42858 3142 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 A0A1B0GUL6 1792 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 TNNI2P48788 182 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 BRI3BPQ8WY22 251 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 TDRD3Q9H7E2 651 aaKnown RBP13.28□□□□□ -0.28
CPNE4-206ENST00000505957 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
CPNE4-206ENST00000505957 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
CPNE4-206ENST00000505957 CCL15-CCL14A0A0B4J2E2 113 aa13.27□□□□□ -0.29
CPNE4-206ENST00000505957 GRM8O00222 908 aa13.27□□□□□ -0.29
CPNE4-206ENST00000505957 HIBADHP31937 336 aaKnown RBP13.27□□□□□ -0.29
CPNE4-206ENST00000505957 VGLL4Q14135 290 aa13.27□□□□□ -0.29
CPNE4-206ENST00000505957 TAF1CQ15572 869 aaPredicted RBP13.27□□□□□ -0.29
CPNE4-206ENST00000505957 CCL15Q16663 113 aa13.27□□□□□ -0.29
CPNE4-206ENST00000505957 SLC9C1Q4G0N8 1177 aa13.27□□□□□ -0.29
CPNE4-206ENST00000505957 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
CPNE4-206ENST00000505957 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
CPNE4-206ENST00000505957 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
CPNE4-206ENST00000505957 FAM84BQ96KN1 310 aaPredicted RBP13.27□□□□□ -0.29
CPNE4-206ENST00000505957 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.29
CPNE4-206ENST00000505957 F6X3S4 739 aa13.26□□□□□ -0.29
CPNE4-206ENST00000505957 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
CPNE4-206ENST00000505957 CRKP46108 304 aa13.26□□□□□ -0.29
CPNE4-206ENST00000505957 FXR1P51114 621 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPNE4-206ENST00000505957 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
CPNE4-206ENST00000505957 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
CPNE4-206ENST00000505957 CSADQ9Y600 493 aa13.26□□□□□ -0.29
CPNE4-206ENST00000505957 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
CPNE4-206ENST00000505957 SPDYE5A6NIY4 337 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 TCP10L2B9ZVM9 353 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 ALDH1L1O75891 902 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 GNRH1P01148 92 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 GYG1P46976 350 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 CDAN1Q8IWY9 1227 aa13.25□□□□□ -0.29
CPNE4-206ENST00000505957 FAM43AQ8N2R8 423 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms