RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 BCAMP50895 628 aa30.9■■■□□ 2.54
HERC4-212ENST00000505760 NOM1Q5C9Z4 860 aaKnown RBP30.9■■■□□ 2.54
HERC4-212ENST00000505760 TRMT2AQ8IZ69 625 aaKnown RBP30.9■■■□□ 2.54
HERC4-212ENST00000505760 USP2O75604 605 aaPredicted RBP30.89■■■□□ 2.54
HERC4-212ENST00000505760 GRIK5Q16478 980 aa30.89■■■□□ 2.54
HERC4-212ENST00000505760 TCP10L2B9ZVM9 353 aa30.88■■■□□ 2.53
HERC4-212ENST00000505760 CT47B1P0C2W7 299 aaPredicted RBP30.88■■■□□ 2.53
HERC4-212ENST00000505760 TNNI2P48788 182 aa30.88■■■□□ 2.53
HERC4-212ENST00000505760 PKN2Q16513 984 aaKnown RBP30.88■■■□□ 2.53
HERC4-212ENST00000505760 ANKRD13AQ8IZ07 590 aa30.88■■■□□ 2.53
HERC4-212ENST00000505760 CFHR5Q9BXR6 569 aa30.88■■■□□ 2.53
HERC4-212ENST00000505760 EYA2O00167 538 aa30.87■■■□□ 2.53
HERC4-212ENST00000505760 HDLBPQ00341 1268 aaKnown RBP30.87■■■□□ 2.53
HERC4-212ENST00000505760 IFNL1Q8IU54 200 aa30.87■■■□□ 2.53
HERC4-212ENST00000505760 TEKT1Q969V4 418 aa30.87■■■□□ 2.53
HERC4-212ENST00000505760 KIF16BQ96L93 1317 aa30.87■■■□□ 2.53
HERC4-212ENST00000505760 FKTNO75072 461 aa30.86■■■□□ 2.53
HERC4-212ENST00000505760 UBTFL1P0CB47 393 aaPredicted RBP30.86■■■□□ 2.53
HERC4-212ENST00000505760 RFX5P48382 616 aaPredicted RBP30.86■■■□□ 2.53
HERC4-212ENST00000505760 NOB1Q9ULX3 412 aaKnown RBP30.86■■■□□ 2.53
HERC4-212ENST00000505760 LAMB1P07942 1786 aa30.86■■■□□ 2.53
HERC4-212ENST00000505760 MYH13Q9UKX3 1938 aa30.86■■■□□ 2.53
HERC4-212ENST00000505760 OTOFQ9HC10 1997 aa30.85■■■□□ 2.53
HERC4-212ENST00000505760 SLC5A1P13866 664 aa30.85■■■□□ 2.53
HERC4-212ENST00000505760 FGFR2P21802 821 aa30.85■■■□□ 2.53
HERC4-212ENST00000505760 SOX10P56693 466 aa30.85■■■□□ 2.53
HERC4-212ENST00000505760 R3HDMLQ9H3Y0 253 aa30.85■■■□□ 2.53
HERC4-212ENST00000505760 TMEM39BQ9GZU3 492 aa30.84■■■□□ 2.53
HERC4-212ENST00000505760 HPS5Q9UPZ3 1129 aa30.84■■■□□ 2.53
HERC4-212ENST00000505760 TNRC18O15417 2968 aaPredicted RBP30.84■■■□□ 2.53
HERC4-212ENST00000505760 MAST3O60307 1309 aa30.83■■■□□ 2.53
HERC4-212ENST00000505760 CDAN1Q8IWY9 1227 aa30.83■■■□□ 2.53
HERC4-212ENST00000505760 LPIN2Q92539 896 aa30.83■■■□□ 2.53
HERC4-212ENST00000505760 TEPSINQ96N21 525 aa30.83■■■□□ 2.53
HERC4-212ENST00000505760 API5Q9BZZ5 524 aaKnown RBP30.83■■■□□ 2.53
HERC4-212ENST00000505760 CCER2I3L3R5 266 aa30.82■■■□□ 2.52
HERC4-212ENST00000505760 ELP3Q9H9T3 547 aa30.82■■■□□ 2.52
HERC4-212ENST00000505760 TMOD2Q9NZR1 351 aa30.82■■■□□ 2.52
HERC4-212ENST00000505760 SUGT1Q9Y2Z0 365 aa30.82■■■□□ 2.52
HERC4-212ENST00000505760 IGF2BP3O00425 579 aaKnown RBP eCLIP30.81■■■□□ 2.52
HERC4-212ENST00000505760 GJA5P36382 358 aa30.81■■■□□ 2.52
HERC4-212ENST00000505760 OTUD7BQ6GQQ9 843 aa30.81■■■□□ 2.52
HERC4-212ENST00000505760 ZDHHC15Q96MV8 337 aa30.81■■■□□ 2.52
HERC4-212ENST00000505760 SIL1Q9H173 461 aa30.81■■■□□ 2.52
HERC4-212ENST00000505760 HDAC5Q9UQL6 1122 aa30.81■■■□□ 2.52
HERC4-212ENST00000505760 CACNB3P54284 484 aa30.8■■■□□ 2.52
HERC4-212ENST00000505760 ATG9AQ7Z3C6 839 aa30.8■■■□□ 2.52
HERC4-212ENST00000505760 MRIQ9BWK5 157 aa30.8■■■□□ 2.52
HERC4-212ENST00000505760 WDR66Q8TBY9 1149 aa30.79■■■□□ 2.52
HERC4-212ENST00000505760 OPTNQ96CV9 577 aa30.79■■■□□ 2.52
HERC4-212ENST00000505760 FBXO3Q9UK99 471 aa30.79■■■□□ 2.52
HERC4-212ENST00000505760 CEP126Q9P2H0 1117 aa30.78■■■□□ 2.52
HERC4-212ENST00000505760 LRRFIP2Q9Y608 721 aaKnown RBP30.78■■■□□ 2.52
HERC4-212ENST00000505760 CIAO1O76071 339 aa30.77■■■□□ 2.52
HERC4-212ENST00000505760 FBXO46Q6PJ61 603 aaPredicted RBP30.77■■■□□ 2.52
HERC4-212ENST00000505760 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.77■■■□□ 2.52
HERC4-212ENST00000505760 MAP3K9P80192 1104 aa30.76■■■□□ 2.51
HERC4-212ENST00000505760 ATP2B3Q16720 1220 aa30.76■■■□□ 2.51
HERC4-212ENST00000505760 APOBEC3HQ6NTF7 200 aaKnown RBP30.76■■■□□ 2.51
HERC4-212ENST00000505760 HHIPL2Q6UWX4 724 aa30.76■■■□□ 2.51
HERC4-212ENST00000505760 CSADQ9Y600 493 aa30.76■■■□□ 2.51
HERC4-212ENST00000505760 VGLL4Q14135 290 aa30.75■■■□□ 2.51
HERC4-212ENST00000505760 GNL3LQ9NVN8 582 aaKnown RBP30.75■■■□□ 2.51
HERC4-212ENST00000505760 RARSP54136 660 aaKnown RBP30.74■■■□□ 2.51
HERC4-212ENST00000505760 FKBP1CQ5VVH2 108 aa30.74■■■□□ 2.51
HERC4-212ENST00000505760 FAM83AQ86UY5 434 aa30.74■■■□□ 2.51
HERC4-212ENST00000505760 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.74■■■□□ 2.51
HERC4-212ENST00000505760 TESPA1A2RU30 521 aaPredicted RBP30.73■■■□□ 2.51
HERC4-212ENST00000505760 IL15P40933 162 aaPredicted RBP30.73■■■□□ 2.51
HERC4-212ENST00000505760 CRHR2Q13324 411 aa30.73■■■□□ 2.51
HERC4-212ENST00000505760 HOOK2Q96ED9 719 aa30.73■■■□□ 2.51
HERC4-212ENST00000505760 PTPN18Q99952 460 aa30.73■■■□□ 2.51
HERC4-212ENST00000505760 CNKSR2Q8WXI2 1034 aa30.72■■■□□ 2.51
HERC4-212ENST00000505760 MEIS3Q99687 375 aa30.72■■■□□ 2.51
HERC4-212ENST00000505760 PDE4DIPQ5VU43 2346 aa30.72■■■□□ 2.51
HERC4-212ENST00000505760 PA2G4Q9UQ80 394 aaKnown RBP30.71■■■□□ 2.51
HERC4-212ENST00000505760 TRIM17Q9Y577 477 aa30.71■■■□□ 2.51
HERC4-212ENST00000505760 GTF2A2P52657 109 aa30.7■■■□□ 2.51
HERC4-212ENST00000505760 ARHGAP45Q92619 1136 aa30.7■■■□□ 2.51
HERC4-212ENST00000505760 OTUD5Q96G74 571 aa30.7■■■□□ 2.51
HERC4-212ENST00000505760 MS4A4AQ96JQ5 239 aa30.7■■■□□ 2.51
HERC4-212ENST00000505760 ERO1AQ96HE7 468 aa30.69■■■□□ 2.5
HERC4-212ENST00000505760 WRNIP1Q96S55 665 aa30.69■■■□□ 2.5
HERC4-212ENST00000505760 COPRSQ9NQ92 184 aa30.69■■■□□ 2.5
HERC4-212ENST00000505760 AK9Q5TCS8 1911 aa30.69■■■□□ 2.5
HERC4-212ENST00000505760 CCL15-CCL14A0A0B4J2E2 113 aa30.68■■■□□ 2.5
HERC4-212ENST00000505760 LDHBP07195 334 aaKnown RBP30.68■■■□□ 2.5
HERC4-212ENST00000505760 CCL15Q16663 113 aa30.68■■■□□ 2.5
HERC4-212ENST00000505760 DCAF15Q66K64 600 aa30.68■■■□□ 2.5
HERC4-212ENST00000505760 OTOP1Q7RTM1 612 aa30.68■■■□□ 2.5
HERC4-212ENST00000505760 DENND2AQ9ULE3 1009 aa30.68■■■□□ 2.5
HERC4-212ENST00000505760 HTTP42858 3142 aa30.67■■■□□ 2.5
HERC4-212ENST00000505760 GNAI3P08754 354 aa30.67■■■□□ 2.5
HERC4-212ENST00000505760 PRDX5P30044 214 aa30.67■■■□□ 2.5
HERC4-212ENST00000505760 DIXDC1Q155Q3 683 aa30.67■■■□□ 2.5
HERC4-212ENST00000505760 INTS3Q68E01 1043 aaKnown RBP30.67■■■□□ 2.5
HERC4-212ENST00000505760 BRI3BPQ8WY22 251 aa30.67■■■□□ 2.5
HERC4-212ENST00000505760 DAGLAQ9Y4D2 1042 aa30.67■■■□□ 2.5
HERC4-212ENST00000505760 RPAP1Q9BWH6 1393 aaPredicted RBP30.66■■■□□ 2.5
HERC4-212ENST00000505760 SEMA3EO15041 775 aa30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms