RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 ZKSCAN1P17029 563 aaPredicted RBP15.27■□□□□ 0.04
LETM1-203ENST00000505551 PIP4K2AP48426 406 aaPredicted RBP15.27■□□□□ 0.04
LETM1-203ENST00000505551 AIMP1Q12904 312 aaKnown RBP15.27■□□□□ 0.04
LETM1-203ENST00000505551 ANKRD1Q15327 319 aa15.27■□□□□ 0.04
LETM1-203ENST00000505551 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.04
LETM1-203ENST00000505551 RAPGEF4Q8WZA2 1011 aa15.27■□□□□ 0.04
LETM1-203ENST00000505551 PXDNQ92626 1479 aa15.27■□□□□ 0.03
LETM1-203ENST00000505551 USP42Q9H9J4 1324 aaKnown RBP15.27■□□□□ 0.03
LETM1-203ENST00000505551 ADD1P35611 737 aaKnown RBP15.27■□□□□ 0.03
LETM1-203ENST00000505551 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.03
LETM1-203ENST00000505551 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.03
LETM1-203ENST00000505551 DDX54Q8TDD1 881 aaKnown RBP15.27■□□□□ 0.03
LETM1-203ENST00000505551 SSH3Q8TE77 659 aa15.27■□□□□ 0.03
LETM1-203ENST00000505551 WDR24Q96S15 920 aa15.27■□□□□ 0.03
LETM1-203ENST00000505551 RAB21Q9UL25 225 aa15.27■□□□□ 0.03
LETM1-203ENST00000505551 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
LETM1-203ENST00000505551 KIFC2Q96AC6 838 aa15.26■□□□□ 0.03
LETM1-203ENST00000505551 MCM6Q14566 821 aa15.26■□□□□ 0.03
LETM1-203ENST00000505551 CREB3L3Q68CJ9 461 aa15.26■□□□□ 0.03
LETM1-203ENST00000505551 FAM71BQ8TC56 605 aa15.26■□□□□ 0.03
LETM1-203ENST00000505551 ZNF335Q9H4Z2 1342 aaPredicted RBP15.25■□□□□ 0.03
LETM1-203ENST00000505551 PSMA5P28066 241 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 TDO2P48775 406 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 COL9A3Q14050 684 aaPredicted RBP15.25■□□□□ 0.03
LETM1-203ENST00000505551 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 FAM107BQ9H098 131 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 USP44Q9H0E7 712 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 CNNM3Q8NE01 707 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 BRF1Q92994 677 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 PPP2R2CQ9Y2T4 447 aa15.25■□□□□ 0.03
LETM1-203ENST00000505551 SSR1P43307 286 aaKnown RBP15.24■□□□□ 0.03
LETM1-203ENST00000505551 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
LETM1-203ENST00000505551 KAT2BQ92831 832 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 UTP14AQ9BVJ6 771 aaKnown RBP15.24■□□□□ 0.03
LETM1-203ENST00000505551 ANKZF1Q9H8Y5 726 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 RBM8AQ9Y5S9 174 aaKnown RBP15.24■□□□□ 0.03
LETM1-203ENST00000505551 MST1RQ04912 1400 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 NBPF7P0C2Y1 421 aaPredicted RBP15.24■□□□□ 0.03
LETM1-203ENST00000505551 GNG11P61952 73 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 NCAPHQ15003 741 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 DPCR1Q3MIW9 517 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 MICALL1Q8N3F8 863 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 MSANTD4Q8NCY6 345 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 ABCC6O95255 1503 aa15.24■□□□□ 0.03
LETM1-203ENST00000505551 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 CCDC189A1A4V9 331 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 DHX58Q96C10 678 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 ARHGAP6O43182 974 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 UBTFL1P0CB47 393 aaPredicted RBP15.23■□□□□ 0.03
LETM1-203ENST00000505551 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
LETM1-203ENST00000505551 JAK2O60674 1132 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 MYL6BP14649 208 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 RPS6KB1P23443 525 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 FANCCQ00597 558 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 POLA2Q14181 598 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 BRINP3Q76B58 766 aa15.23■□□□□ 0.03
LETM1-203ENST00000505551 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
LETM1-203ENST00000505551 ERLIN1O75477 346 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 BLOC1S2Q6QNY1 142 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 FMR1NBQ8N0W7 255 aaPredicted RBP15.22■□□□□ 0.03
LETM1-203ENST00000505551 FSIP1Q8NA03 581 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 MAP4K1Q92918 833 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 FAM208AQ9UK61 1670 aaKnown RBP15.22■□□□□ 0.03
LETM1-203ENST00000505551 SLC27A2O14975 620 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
LETM1-203ENST00000505551 ERLIN2O94905 339 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 HNRNPH1P31943 449 aaKnown RBP15.22■□□□□ 0.03
LETM1-203ENST00000505551 CHMP4BP1P59074 171 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 CEBPZQ03701 1054 aaKnown RBP15.22■□□□□ 0.03
LETM1-203ENST00000505551 KCNV1Q6PIU1 500 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 DDX11Q96FC9 970 aa15.22■□□□□ 0.03
LETM1-203ENST00000505551 PXDNLA1KZ92 1463 aa15.21■□□□□ 0.03
LETM1-203ENST00000505551 TATP17735 454 aaPredicted RBP15.21■□□□□ 0.03
LETM1-203ENST00000505551 USP8P40818 1118 aa15.21■□□□□ 0.03
LETM1-203ENST00000505551 KIAA1468Q9P260 1216 aa15.21■□□□□ 0.03
LETM1-203ENST00000505551 NEDD4P46934 1319 aa15.21■□□□□ 0.03
LETM1-203ENST00000505551 H3BQV1 296 aa15.21■□□□□ 0.02
LETM1-203ENST00000505551 SURF6O75683 361 aaKnown RBP15.21■□□□□ 0.02
LETM1-203ENST00000505551 TRDNQ13061 729 aa15.21■□□□□ 0.02
LETM1-203ENST00000505551 CWF19L2Q2TBE0 894 aaKnown RBP15.21■□□□□ 0.02
LETM1-203ENST00000505551 IFFO2Q5TF58 517 aa15.21■□□□□ 0.02
LETM1-203ENST00000505551 PNKPQ96T60 521 aa15.21■□□□□ 0.02
LETM1-203ENST00000505551 FTOQ9C0B1 505 aaKnown RBP eCLIP15.21■□□□□ 0.02
LETM1-203ENST00000505551 ABCB6Q9NP58 842 aa15.21■□□□□ 0.02
LETM1-203ENST00000505551 CUTAO60888 179 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 MNAT1P51948 309 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 HSP90B2PQ58FF3 399 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
LETM1-203ENST00000505551 TSHZ1Q6ZSZ6 1077 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms